Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G314500.1 | Wheat | peroxisome | 90.16 | 95.44 |
| TraesCS1A01G304000.1 | Wheat | peroxisome | 95.08 | 94.5 |
| HORVU1Hr1G069140.1 | Barley | cytosol | 89.34 | 93.36 |
| Zm00001d038518_P001 | Maize | cytosol | 71.72 | 70.42 |
| EES18409 | Sorghum | cytosol | 70.7 | 69.98 |
| Os05t0485400-00 | Rice | peroxisome | 70.29 | 68.6 |
| VIT_07s0005g03700.t01 | Wine grape | cytosol | 39.96 | 40.04 |
| PGSC0003DMT400087504 | Potato | nucleus | 38.93 | 39.09 |
| Solyc09g066450.1.1 | Tomato | cytosol | 38.93 | 38.0 |
| KRH19587 | Soybean | cytosol | 37.91 | 35.17 |
| TraesCS2D01G208500.1 | Wheat | cytosol | 31.56 | 34.3 |
| KRH32212 | Soybean | cytosol | 37.09 | 33.71 |
| TraesCS6D01G153000.1 | Wheat | cytosol | 24.59 | 30.38 |
| TraesCS2D01G534700.1 | Wheat | cytosol | 18.65 | 28.98 |
| TraesCS7D01G379200.1 | Wheat | cytosol | 25.2 | 28.94 |
| TraesCS3D01G482600.1 | Wheat | cytosol | 25.41 | 27.25 |
| TraesCS6D01G055100.1 | Wheat | cytosol | 17.21 | 26.75 |
| TraesCS3D01G385400.1 | Wheat | cytosol | 27.46 | 25.92 |
| TraesCS5D01G148000.1 | Wheat | plastid | 34.43 | 25.73 |
| TraesCS3D01G385500.1 | Wheat | cytosol | 27.25 | 25.63 |
| TraesCS4D01G122000.1 | Wheat | plastid | 35.45 | 25.48 |
| TraesCS2D01G055700.1 | Wheat | extracellular, golgi, mitochondrion, plastid | 16.19 | 25.32 |
| TraesCS3D01G220100.3 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 27.05 | 24.58 |
| TraesCS4D01G338800.1 | Wheat | cytoskeleton, cytosol, peroxisome, plastid | 23.16 | 23.11 |
| TraesCS5D01G139500.1 | Wheat | mitochondrion | 26.23 | 22.9 |
| TraesCS2D01G302600.1 | Wheat | cytosol, mitochondrion, nucleus | 22.54 | 22.73 |
| TraesCS1D01G421200.1 | Wheat | cytosol | 23.16 | 22.24 |
| TraesCS4D01G054000.1 | Wheat | cytosol | 24.59 | 21.82 |
| TraesCS7D01G053600.1 | Wheat | plastid | 27.87 | 21.69 |
| TraesCS4D01G040400.1 | Wheat | cytosol | 26.43 | 20.71 |
| TraesCS4D01G127800.2 | Wheat | mitochondrion | 19.67 | 20.21 |
| TraesCS2D01G095300.1 | Wheat | nucleus | 29.51 | 20.14 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G303500.1 | EnsemblPlantsGene:TraesCS1D01G303500 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF22 |
| PFAM:PF03514 | PFscan:PS50985 | MapMan:15.5.12 | : | : | : |
Description
No Description!
Coordinates
chr1D:+:401357606..401359072
Molecular Weight (calculated)
51520.5 Da
IEP (calculated)
6.623
GRAVY (calculated)
0.043
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MINHLMSGRG SSVDMHDSSL GLMQFHDHHQ YMYGSSTGPF LPQHHGFIHP EDDRCPGKVV TALVEQATAG VAEEVEFGAC KEGEDVVAVG QERQQEDAPK
101: PGEEKEAQGV RMIALLMECA VAMSVGNLAD ANGTLLELSQ MASPYAPSCG ERLVAYFARA MAARLMSSWV GVCAPVHPSS ASSWSGVHAA FRAFHSVAPF
201: ARCAYLACNQ AILGAFHGKR LVHVVDLDVV PGGALQWLPL LSALAARPGG PPVLRVTGFG VSASALHDAG TQLAGLATKL GIPFEFYAVA KRPGDVVDAV
301: ADLPSRRPGE VVAVHWLRHA LYDAAGDDVV TMRLVRWLQP KVVTLVEQER GPTGGDGGQF LDRFVAALHH YSAVFDALGA ARPADGDASR HLVENGVLGR
401: EIGNVLAVAG PTRSGREMFG SWQAELARNG FLRAGAGGRA QVLAGACPAG LGYTVADDHD GTVRLGWKGT PLYAVSTWTC CTTAHARA
101: PGEEKEAQGV RMIALLMECA VAMSVGNLAD ANGTLLELSQ MASPYAPSCG ERLVAYFARA MAARLMSSWV GVCAPVHPSS ASSWSGVHAA FRAFHSVAPF
201: ARCAYLACNQ AILGAFHGKR LVHVVDLDVV PGGALQWLPL LSALAARPGG PPVLRVTGFG VSASALHDAG TQLAGLATKL GIPFEFYAVA KRPGDVVDAV
301: ADLPSRRPGE VVAVHWLRHA LYDAAGDDVV TMRLVRWLQP KVVTLVEQER GPTGGDGGQF LDRFVAALHH YSAVFDALGA ARPADGDASR HLVENGVLGR
401: EIGNVLAVAG PTRSGREMFG SWQAELARNG FLRAGAGGRA QVLAGACPAG LGYTVADDHD GTVRLGWKGT PLYAVSTWTC CTTAHARA
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.