Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G120200.1 | Wheat | nucleus | 96.77 | 6.3 |
| HORVU2Hr1G020680.2 | Barley | cytosol | 96.77 | 6.11 |
| TraesCS2A01G119300.1 | Wheat | nucleus | 96.77 | 5.3 |
| TraesCS2B01G139000.1 | Wheat | nucleus | 96.77 | 5.25 |
| Os01t0925700-01 | Rice | cytosol | 61.29 | 5.12 |
| Zm00001d022499_P001 | Maize | plastid | 93.55 | 5.08 |
| KXG36890 | Sorghum | plastid | 93.55 | 5.07 |
| Zm00001d007111_P001 | Maize | plastid | 93.55 | 5.06 |
| Os01t0367700-01 | Rice | plasma membrane | 90.32 | 5.02 |
| Solyc01g098160.2.1 | Tomato | nucleus | 87.1 | 4.7 |
| PGSC0003DMT400057839 | Potato | cytosol | 87.1 | 4.69 |
| KRH34013 | Soybean | nucleus | 87.1 | 4.66 |
| VIT_14s0030g01260.t01 | Wine grape | cytosol, nucleus, plastid | 87.1 | 4.64 |
| KRH68662 | Soybean | nucleus | 87.1 | 4.56 |
| KRG96918 | Soybean | cytosol | 83.87 | 4.55 |
| KRG92786 | Soybean | nucleus | 83.87 | 4.48 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 80.65 | 4.22 |
| Bra027966.1-P | Field mustard | nucleus | 74.19 | 4.09 |
| CDY67158 | Canola | plastid | 74.19 | 4.06 |
| CDX95237 | Canola | nucleus | 74.19 | 4.03 |
| AT1G54610.1 | Thale cress | nucleus | 74.19 | 4.02 |
| CDY27801 | Canola | cytosol | 74.19 | 3.95 |
| Bra039466.1-P | Field mustard | plastid | 74.19 | 3.95 |
| CDY41930 | Canola | cytosol | 74.19 | 3.92 |
| Bra009977.1-P | Field mustard | cytosol, nucleus, plastid | 67.74 | 3.72 |
| CDX86178 | Canola | cytosol, nucleus, plastid | 67.74 | 3.72 |
| CDX80672 | Canola | cytosol, plastid | 67.74 | 3.67 |
| CDY18783 | Canola | plastid | 67.74 | 3.63 |
| Bra040637.1-P | Field mustard | plastid | 67.74 | 3.63 |
| CDY53230 | Canola | nucleus, plastid | 67.74 | 3.6 |
| Os08t0112500-01 | Rice | nucleus | 83.87 | 3.48 |
| Os11t0242500-01 | Rice | mitochondrion | 64.52 | 3.45 |
| Os07t0596600-02 | Rice | plasma membrane | 67.74 | 2.97 |
| Os12t0577700-00 | Rice | plasma membrane | 67.74 | 2.84 |
| Os02t0559300-02 | Rice | plasma membrane | 64.52 | 2.74 |
| Os01t0958000-01 | Rice | plasma membrane | 45.16 | 2.73 |
| Os05t0389700-01 | Rice | nucleus | 41.94 | 2.5 |
| Os08t0453800-00 | Rice | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| Os02t0304500-00 | Rice | plastid | 0.0 | 0.0 |
| Os01t0201000-01 | Rice | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os07t0668000-00 | EnsemblPlantsGene:Os07g0668000 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF219 | ProteinID:BAT03120.1 | UniParc:UPI0003939DED |
| UniProt:A0A0P0XA24 | MapMan:35.2 | : | : | : | : |
Description
CDK-LIKE 6, cyclin-dependent kinase-like 6Similar to cDNA clone:J033024L12, full insert sequence. (Os07t0668000-00)
Coordinates
chr7:+:28208976..28209746
Molecular Weight (calculated)
3598.1 Da
IEP (calculated)
5.721
GRAVY (calculated)
-1.800
Length
31 amino acids
Sequence
(BLAST)
(BLAST)
1: TEPHACDPSS LPQYPPSKEM DAKRRDEEAR R
001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
Arabidopsis Description
Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.