Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G119300.1 | Wheat | nucleus | 97.37 | 98.23 |
| Os07t0668000-00 | Rice | cytosol, plasma membrane | 5.25 | 96.77 |
| TraesCS2D01G120200.1 | Wheat | nucleus | 78.11 | 93.7 |
| KXG36890 | Sorghum | plastid | 88.27 | 88.11 |
| Zm00001d007111_P001 | Maize | plastid | 87.92 | 87.61 |
| Zm00001d022499_P001 | Maize | plastid | 87.22 | 87.22 |
| TraesCS4B01G151800.1 | Wheat | nucleus | 79.68 | 83.03 |
| HORVU2Hr1G020680.2 | Barley | cytosol | 69.0 | 80.24 |
| Solyc01g098160.2.1 | Tomato | nucleus | 67.95 | 67.48 |
| PGSC0003DMT400057839 | Potato | cytosol | 67.95 | 67.36 |
| KRG96918 | Soybean | cytosol | 65.5 | 65.38 |
| Bra027966.1-P | Field mustard | nucleus | 63.92 | 64.83 |
| CDY67158 | Canola | plastid | 64.1 | 64.66 |
| VIT_14s0030g01260.t01 | Wine grape | cytosol, nucleus, plastid | 65.85 | 64.6 |
| CDX95237 | Canola | nucleus | 64.1 | 64.1 |
| AT1G54610.1 | Thale cress | nucleus | 64.1 | 63.99 |
| KRH34013 | Soybean | nucleus | 64.45 | 63.45 |
| KRH68662 | Soybean | nucleus | 65.67 | 63.34 |
| KRG92786 | Soybean | nucleus | 63.05 | 62.07 |
| CDX86178 | Canola | cytosol, nucleus, plastid | 54.99 | 55.58 |
| Bra009977.1-P | Field mustard | cytosol, nucleus, plastid | 54.99 | 55.58 |
| Bra040637.1-P | Field mustard | plastid | 56.04 | 55.36 |
| CDY18783 | Canola | plastid | 56.04 | 55.36 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 57.27 | 55.14 |
| CDX80672 | Canola | cytosol, plastid | 55.17 | 55.07 |
| CDY53230 | Canola | nucleus, plastid | 55.87 | 54.62 |
| CDY27801 | Canola | cytosol | 55.52 | 54.37 |
| Bra039466.1-P | Field mustard | plastid | 55.52 | 54.37 |
| CDY41930 | Canola | cytosol | 55.52 | 54.0 |
| TraesCS3B01G158600.1 | Wheat | cytosol | 56.04 | 46.72 |
| TraesCS3B01G473100.1 | Wheat | cytosol, plasma membrane, plastid | 45.53 | 46.59 |
| TraesCS6B01G231200.2 | Wheat | cytosol | 50.09 | 41.03 |
| TraesCS7B01G220500.1 | Wheat | nucleus | 52.36 | 40.24 |
| TraesCS2B01G209300.1 | Wheat | plastid | 48.51 | 40.03 |
| TraesCS7B01G345800.1 | Wheat | nucleus | 39.05 | 39.19 |
| TraesCS1B01G254800.1 | Wheat | nucleus | 33.8 | 37.77 |
| TraesCS5B01G081500.1 | Wheat | nucleus | 44.66 | 37.67 |
| TraesCS3B01G561200.1 | Wheat | nucleus | 33.27 | 37.48 |
| TraesCS5B01G110400.1 | Wheat | nucleus | 20.84 | 37.07 |
| TraesCS4B01G089100.3 | Wheat | mitochondrion | 44.31 | 36.72 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 |
| PANTHER:PTHR24056:SF176 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| EnsemblPlantsGene:TraesCS2B01G139000 | EnsemblPlants:TraesCS2B01G139000.1 | TIGR:cd07840 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2B:-:105909247..105913990
Molecular Weight (calculated)
62776.7 Da
IEP (calculated)
10.062
GRAVY (calculated)
-0.604
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVHGRPSA ASTPSPDAAR RRNPQPKQEG AAPDAAAAAA AEAAGEGRQP AEKDGQTAVA APVKRERRSR SSRHGPAHAE VRLGGSFANK ARGEQVAAGW
101: PAWLSAVAGE AINGWTPRRA DTFEKIDKIG QGTYSNVYKA RDSMSGKIVA LKKVRFDNLE PESVRFMARE ILILRRLDHP NVMKLYGLVT SRMSCSLYLV
201: FDYMVHDLAG LAASPDIKFT LPQVKCYVHQ LLSGLEHCHN QGVLHRDIKG SNLLLDDDGV LKIGDFGLAS FFDPNHKQPM TSRVVTLWYR PPELLLGATD
301: YGVGVDLWSA GCILAELLAG KPIMPGRTEV EQLHKIFKLC GSPAEEYWKK SKLPHATIFK PQQPYKRRIA ETFKDFPQSA LRLIETLLSI DPADRLTATD
401: ALNSDFFKTE PRACDPSSLP QYPPSKEMDA KRRDEEARRL RAAGSRPNGD GARKTRTRDR PRAVPAPEAN AELQANIDKR RLITHANAKS KSEKFPPPHQ
501: DGALGYPLGC SNHMEPTFEP PDPSSFSTVF PYDKTAVPTW SGPLVDPPGG NQKRKHKSGR SSKQPSTARA R
101: PAWLSAVAGE AINGWTPRRA DTFEKIDKIG QGTYSNVYKA RDSMSGKIVA LKKVRFDNLE PESVRFMARE ILILRRLDHP NVMKLYGLVT SRMSCSLYLV
201: FDYMVHDLAG LAASPDIKFT LPQVKCYVHQ LLSGLEHCHN QGVLHRDIKG SNLLLDDDGV LKIGDFGLAS FFDPNHKQPM TSRVVTLWYR PPELLLGATD
301: YGVGVDLWSA GCILAELLAG KPIMPGRTEV EQLHKIFKLC GSPAEEYWKK SKLPHATIFK PQQPYKRRIA ETFKDFPQSA LRLIETLLSI DPADRLTATD
401: ALNSDFFKTE PRACDPSSLP QYPPSKEMDA KRRDEEARRL RAAGSRPNGD GARKTRTRDR PRAVPAPEAN AELQANIDKR RLITHANAKS KSEKFPPPHQ
501: DGALGYPLGC SNHMEPTFEP PDPSSFSTVF PYDKTAVPTW SGPLVDPPGG NQKRKHKSGR SSKQPSTARA R
001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
Arabidopsis Description
Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.