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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G54610.1 VIT_06s0009g01910.t01 AT2G41090.1 17360592
AT1G54610.1 VIT_08s0040g00470.t01 AT2G41090.1 17360592
AT1G54610.1 VIT_06s0009g01910.t01 AT2G41100.1 17360592
AT1G54610.1 VIT_08s0040g00470.t01 AT2G41100.1 17360592
AT1G54610.1 VIT_05s0020g04420.t01 AT4G14640.1 17360592
AT1G54610.1 VIT_06s0009g01910.t01 AT5G21274.1 17360592
AT1G54610.1 VIT_08s0040g00470.t01 AT5G21274.1 17360592
AT3G05050.1 VIT_05s0020g04420.t01 AT4G14640.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0668000-00 Rice cytosol, plasma membrane 4.64 87.1
VIT_05s0020g01890.t01 Wine grape cytosol 73.88 74.78
KRG96918 Soybean cytosol 72.51 73.78
Solyc01g098160.2.1 Tomato nucleus 71.13 72.0
KRH68662 Soybean nucleus 73.2 71.96
PGSC0003DMT400057839 Potato cytosol 70.96 71.7
TraesCS2D01G120200.1 Wheat nucleus 57.73 70.59
Bra027966.1-P Field mustard nucleus 68.04 70.34
CDY67158 Canola plastid 68.21 70.14
CDX95237 Canola nucleus 68.73 70.05
KRH34013 Soybean nucleus 69.76 70.0
KRG92786 Soybean nucleus 68.73 68.97
AT1G54610.1 Thale cress nucleus 67.7 68.88
Zm00001d047482_P001 Maize nucleus 64.6 68.61
Zm00001d029143_P003 Maize nucleus 63.23 67.28
OQU92600 Sorghum nucleus 65.12 67.2
TraesCS4B01G151800.1 Wheat nucleus 63.06 66.97
Zm00001d022499_P001 Maize plastid 65.64 66.9
Zm00001d007111_P001 Maize plastid 65.81 66.84
TraesCS2A01G119300.1 Wheat nucleus 64.78 66.61
KXG36890 Sorghum plastid 64.95 66.08
TraesCS4D01G151100.1 Wheat nucleus 62.89 66.06
TraesCS2B01G139000.1 Wheat nucleus 64.6 65.85
TraesCS4A01G142300.1 Wheat nucleus 62.37 65.52
HORVU4Hr1G048510.1 Barley cytosol 56.7 59.57
HORVU2Hr1G020680.2 Barley cytosol 49.83 59.06
VIT_05s0124g00500.t01 Wine grape cytosol 41.75 58.84
VIT_17s0000g00620.t01 Wine grape nucleus 57.39 56.9
Bra040637.1-P Field mustard plastid 56.36 56.75
CDY18783 Canola plastid 56.36 56.75
VIT_18s0072g00140.t01 Wine grape cytosol 41.07 56.5
AT3G05050.1 Thale cress nucleus, plastid 57.04 55.99
VIT_04s0079g00700.t01 Wine grape cytosol, plastid 41.75 55.73
CDY53230 Canola nucleus, plastid 55.84 55.65
Bra009977.1-P Field mustard cytosol, nucleus, plastid 53.61 55.22
CDX86178 Canola cytosol, nucleus, plastid 53.61 55.22
CDX80672 Canola cytosol, plastid 53.78 54.72
CDY41930 Canola cytosol 54.81 54.34
CDY27801 Canola cytosol 54.3 54.2
Bra039466.1-P Field mustard plastid 54.12 54.03
VIT_07s0141g00280.t01 Wine grape cytosol 21.82 51.21
VIT_19s0014g02670.t01 Wine grape nucleus 56.19 45.93
VIT_18s0001g06780.t01 Wine grape nucleus 50.52 44.14
VIT_12s0035g01180.t01 Wine grape nucleus 54.12 42.51
VIT_17s0000g06650.t01 Wine grape plastid 48.8 41.4
VIT_14s0108g01270.t01 Wine grape nucleus 46.74 38.2
VIT_06s0009g01800.t01 Wine grape nucleus 33.68 37.91
VIT_07s0031g01920.t01 Wine grape cytosol, nucleus, plasma membrane, plastid 38.14 37.12
VIT_00s0805g00020.t01 Wine grape cytosol, mitochondrion, nucleus 21.65 27.1
Protein Annotations
Gene3D:1.10.510.10EntrezGene:100253772wikigene:100253772MapMan:18.4.3.1.8Gene3D:3.30.200.20EMBL:AM433343
ProteinID:CAN73716ProteinID:CAN73716.1ProteinID:CBI34246ProteinID:CBI34246.3UniProt:D7TUS1EMBL:FN596249
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004693GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464
GO:GO:0006468GO:GO:0007049GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538GO:GO:0051726InterPro:IPR000719InterPro:Kinase-like_dom_sfEntrezGene:LOC100253772
wikigene:LOC100253772PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24056
PANTHER:PTHR24056:SF176InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
TIGR:TC59342UniParc:UPI00015CB5C4ArrayExpress:VIT_14s0030g01260EnsemblPlantsGene:VIT_14s0030g01260EnsemblPlants:VIT_14s0030g01260.t01unigene:Vvi.8764
RefSeq:XP_002273085RefSeq:XP_002273085.1RefSeq:XP_019080821.1SEG:seg::
Description
No Description!
Coordinates
chr14:-:5779886..5786929
Molecular Weight (calculated)
64367.1 Da
IEP (calculated)
10.065
GRAVY (calculated)
-0.578
Length
582 amino acids
Sequence
(BLAST)
001: MGCVLGREVL SNVVVSEANG AEKSIKEKRS NSSVNSNRKL DDVTKKSDSK VEVGNGETQK EEKTDGSQRP RGDKKKLRSN PRLSNLPNHV RGEQVAAGWP
101: SWLSDVAGPA LNGWIPRRAD TFQKLDKIGQ GTYSNVYKAR DMLTGKIVAL KKVRFDNLEP ESVKFMAREI VILRRLDHPN VVKLEGLVTS RLSCSLYLVF
201: EYMEHDLAGL AASPGIKFTE PQVKCYMKQL LSGLEHCHNR GVLHRDIKGS NLLLDNGGVL KIADFGLAAI FDPNYKHPMT SRVVTLWYRP PELLLGANDY
301: GVGVDLWSAG CILAELLAGK PIMPGRTEVE QLHKIYKLCG SPSDEYWKKY RLPNATLFKP REPYKRCIAE TFKDFPPSSL PLIETLLAID PVERRTATAA
401: LNCEFFTTKP YACEPSSLPQ YPPSKEMDAK RRDDEARRQK TASKAHGDGA KKMRPRARAM PGPEANAELQ SNLDRRRLIS HANAKSKSEK FPPPHQDGAV
501: GFPLGASQHI DPAFVPGDVP FSSTSFTSSK DHAQTWSGPI GDPAAIGALR RKKNTYGDAR EPKKPAAVNP RDGSAKVRVV KG
Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)
001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
Arabidopsis Description
Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.