Factsheet for VIT_17s0000g06650.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63286	Soybean	nucleus	73.62	74.93
KRH54601	Soybean	plastid	73.76	74.52
Solyc03g115660.2.1	Tomato	nucleus	73.18	72.65
PGSC0003DMT400063133	Potato	nucleus	73.47	72.62
KRH56877	Soybean	nucleus, plastid	70.41	72.09
CDY71137	Canola	plastid	45.77	72.02
KRH03527	Soybean	nucleus, plastid	71.14	71.87
CDX83825	Canola	plastid	66.62	65.1
CDX73077	Canola	cytosol	60.35	64.79
GSMUA_Achr6P24660_001	Banana	nucleus	61.52	64.72
AT1G18670.3	Thale cress	nucleus	67.64	64.44
AT1G74330.1	Thale cress	nucleus	65.6	64.38
CDX96534	Canola	cytosol	59.91	64.32
Bra015920.1-P	Field mustard	cytosol	59.62	64.01
CDX81891	Canola	plastid	64.87	63.75
CDX96706	Canola	nucleus	66.76	61.81
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	59.18	61.33
Bra016547.1-P	Field mustard	nucleus	65.89	60.92
TraesCS2A01G182800.1	Wheat	plastid	60.2	59.68
TraesCS2B01G209300.1	Wheat	plastid	60.06	59.54
HORVU2Hr1G034440.3	Barley	plastid	59.91	59.14
TraesCS2D01G190600.1	Wheat	plastid	59.62	59.1
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	57.14	59.04
Os07t0596600-02	Rice	plasma membrane	60.35	58.56
GSMUA_Achr4P28060_001	Banana	nucleus	57.43	58.54
GSMUA_Achr4P03350_001	Banana	nucleus	56.71	58.32
OQU90194	Sorghum	plastid	60.06	58.19
GSMUA_Achr2P13490_001	Banana	nucleus	55.1	58.06
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	58.75	57.65
Zm00001d006759_P012	Maize	plastid	59.62	56.73
VIT_14s0108g01270.t01	Wine grape	nucleus	58.75	56.6
VIT_05s0124g00500.t01	Wine grape	cytosol	32.94	54.72
Zm00001d022041_P001	Maize	plastid	58.45	53.54
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	32.94	51.83
VIT_07s0141g00280.t01	Wine grape	cytosol	18.66	51.61
VIT_05s0020g01890.t01	Wine grape	cytosol	41.69	49.74
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	41.4	48.8
VIT_18s0072g00140.t01	Wine grape	cytosol	29.88	48.46
VIT_17s0000g00620.t01	Wine grape	nucleus	39.07	45.66
VIT_19s0014g02670.t01	Wine grape	nucleus	45.63	43.96
VIT_18s0001g06780.t01	Wine grape	nucleus	42.13	43.39
VIT_12s0035g01180.t01	Wine grape	nucleus	43.44	40.22
VIT_06s0009g01800.t01	Wine grape	nucleus	28.13	37.33
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	31.49	36.12
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	19.24	28.39

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100852764	wikigene:100852764	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ProteinID:CBI15183
ProteinID:CBI15183.3	UniProt:D7SI73	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100852764	wikigene:LOC100852764	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000198522A	ArrayExpress:VIT_17s0000g06650	EnsemblPlantsGene:VIT_17s0000g06650
EnsemblPlants:VIT_17s0000g06650.t01	unigene:Vvi.22051	RefSeq:XP_003634302	RefSeq:XP_003634302.1	RefSeq:XP_010663340.1	SEG:seg

Description

No Description!

Coordinates

chr17:-:7210573..7217743

Molecular Weight (calculated)

76174.2 Da

IEP (calculated)

9.684

GRAVY (calculated)

-0.600

Length

686 amino acids

Sequence
(BLAST)

001: MGCVSSKQAV SVTPAFDVSV AFRDNAGSGR SRGGRVVAAE FEKKKKSGGG ESGLSGSELG ESGRVSSNGG GDSLSFRLGN LHKYVEGEQV AAGWPAWLSA
101: VAGEAIQGWV PLRADSYQTL EKIGQGTYST VFRARELETG RVVALKKVRF DNFEPESVRF MAREITILRR LDHPNIVKLD GLITSRLSCS IYLVFEYMEH
201: DLSGLMSCPD IKFSESQVKC YTKQLLSGLE HCHSRGVMHR DIKGANLLVN NEGILKIADF GLANFCSSVY RQPLTSRVVT LWYRPPELLL GSTDYGASVD
301: LWSVGCVFAE LLVGRPILKG RTEVEQLHKI FKLCGSPPDE YWKKSKLPHA TLFKPQQPYE SCLRESFKDL PTISVDLIET LLSVEPYKRG TASSALASEY
401: FKTKPYACDP SSLPKYSPNK EIDAKNREES RRKKVGGRVR GSEKPTRKPN GINKLVPAEN FTAQTQGPHK LNGNGFHIFK EGDGKLGGEP PKPSIDVLTE
501: ASHMKNASQG DIPFSGPLQV STSSGFAWAK RRKDDASTRS HSRSSSRGLG CNALEPNAAL HARNNSNRLE NSDVSNGGRT DSRGYDSSEI AKRVMLKQWG
601: QFERPDSFDA SDMYHSQELS LPMYRREEMA AKRNHLSYQD QGEKVEFSGP LLSQSHRVDE LLERHERHIR QAVRRSWFQR GKKNGK

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.