Factsheet for PGSC0003DMT400063133

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g115660.2.1	Tomato	nucleus	97.98	98.41
VIT_17s0000g06650.t01	Wine grape	plastid	72.62	73.47
CDY71137	Canola	plastid	45.24	72.02
KRH56877	Soybean	nucleus, plastid	67.58	70.0
KRH63286	Soybean	nucleus	67.87	69.88
KRH54601	Soybean	plastid	67.87	69.37
KRH03527	Soybean	nucleus, plastid	67.58	69.07
GSMUA_Achr6P24660_001	Banana	nucleus	59.94	63.8
CDX83825	Canola	plastid	64.41	63.68
CDX73077	Canola	cytosol	58.07	63.07
AT1G18670.3	Thale cress	nucleus	65.42	63.06
Bra015920.1-P	Field mustard	cytosol	57.78	62.75
CDX96534	Canola	cytosol	57.64	62.6
AT1G74330.1	Thale cress	nucleus	62.68	62.23
CDX81891	Canola	plastid	61.82	61.46
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	58.21	61.03
CDX96706	Canola	nucleus	64.27	60.19
Bra016547.1-P	Field mustard	nucleus	63.26	59.16
GSMUA_Achr2P13490_001	Banana	nucleus	54.47	58.06
TraesCS2A01G182800.1	Wheat	plastid	57.06	57.23
HORVU2Hr1G034440.3	Barley	plastid	57.2	57.12
TraesCS2D01G190600.1	Wheat	plastid	56.92	57.08
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	54.61	57.08
TraesCS2B01G209300.1	Wheat	plastid	56.77	56.94
OQU90194	Sorghum	plastid	58.07	56.92
Os07t0596600-02	Rice	plasma membrane	57.78	56.72
GSMUA_Achr4P28060_001	Banana	nucleus	54.76	56.46
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	56.34	55.94
GSMUA_Achr4P03350_001	Banana	nucleus	53.75	55.92
Zm00001d006759_P012	Maize	plastid	57.93	55.76
PGSC0003DMT400003634	Potato	plastid	52.45	54.9
PGSC0003DMT400073963	Potato	cytosol	21.04	54.68
Zm00001d022041_P001	Maize	plastid	56.92	52.74
PGSC0003DMT400076796	Potato	nucleus	49.42	50.59
PGSC0003DMT400027661	Potato	nucleus	40.06	47.28
PGSC0003DMT400011092	Potato	cytosol	38.62	47.27
PGSC0003DMT400057839	Potato	cytosol	38.62	46.53
PGSC0003DMT400050723	Potato	cytosol	30.4	45.77
PGSC0003DMT400073941	Potato	cytosol	35.88	43.99
PGSC0003DMT400071458	Potato	nucleus	40.63	43.79
PGSC0003DMT400083223	Potato	cytosol	40.06	43.64
PGSC0003DMT400032406	Potato	nucleus	43.8	41.93
PGSC0003DMT400040754	Potato	cytosol	32.28	41.64
PGSC0003DMT400034197	Potato	nucleus	40.06	41.25
PGSC0003DMT400064016	Potato	nucleus	41.93	39.92
PGSC0003DMT400047231	Potato	nucleus	40.78	39.47
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	32.28	38.69
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	35.16	37.54
PGSC0003DMT400015241	Potato	nucleus	25.07	34.39
PGSC0003DMT400004748	Potato	nucleus	1.59	7.28

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102605724	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CA46	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400024559
PGSC:PGSC0003DMG400024559	EnsemblPlants:PGSC0003DMT400063133	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295ABBE	RefSeq:XP_006345172.1	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024559]

Coordinates

chr3:+:55496037..55503079

Molecular Weight (calculated)

77263.7 Da

IEP (calculated)

9.294

GRAVY (calculated)

-0.592

Length

694 amino acids

Sequence
(BLAST)

001: MGCVASKQTV SVTPAFDHSG ILVRDGEDVG SGRGRVGSGG FGLDFDLKKV KKRGDSGLSG AESELDESGR ASSNGCGSES VSFRLGNLQK YVEGEQVAAG
101: WPAWLSAVAG EAIQGWVPLR AESFEKLEKI GQGTYSSVFK ARDLESGRTV ALKKVRFDNF EPESVRFMAR EIMILRRLDH PNIIKLEGLI TSRLSCSMYL
201: VFEYMEHDIS GLLSCPEVEF SESQIKCYMK QLLSGIEHCH SRGVMHRDIK GANLLVNNDG ILKVADFGLA NFCNLGRKQP LTSRVVTLWY RPPELLLGST
301: EYGASVDLWS VGCVFGELLT GKPILQGRTE VEQLHKIFKL CGSPPDDYWK KSKLPHATLF KPQHPYESCL WDTFKDLTKS SVSLIETLLS VEPPKRGTAS
401: SALASEYFKT RPHACDPLSL PKYPPSKEID AKYCEEAKRK KPSGRARGPE TTRKSIRKQN ATNKLAPEEK LPVQNQGVPK SNGSSLGTLK EGDIIIGLER
501: PKPSVDLRGE ASHIKNASQG DFPFSGPLQV SGSSGFAWAK RRVDDSSMRS RSKSSSRSLK FEPSGALHTK NNMELKKQEN YEATNGSRTN SKGRDTYEST
601: KHAMQRHWSQ LEQTDSFDAS DGYHSQELSL ALYLKEETAF KRINVVQDQM DKVEFSGPLL SQSHRVEELL EKHERQIRQA VRRSWFQRVR KNGN

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.