Factsheet for PGSC0003DMT400064516

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071920.1.1	Tomato	nucleus	93.09	94.73
VIT_18s0072g00140.t01	Wine grape	cytosol	47.84	65.48
PGSC0003DMT400050723	Potato	cytosol	46.63	58.57
GSMUA_Achr6P02960_001	Banana	cytosol	36.1	58.22
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	43.52	53.28
PGSC0003DMT400073963	Potato	cytosol	24.01	52.06
KRH35103	Soybean	nucleus	54.06	51.91
TraesCS7B01G345800.1	Wheat	nucleus	45.94	46.75
TraesCS7D01G435700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	46.11	46.6
Os02t0304500-00	Rice	plastid	40.24	44.72
EER88844	Sorghum	vacuole	39.72	40.49
PGSC0003DMT400057839	Potato	cytosol	40.07	40.28
PGSC0003DMT400027661	Potato	nucleus	40.07	39.46
PGSC0003DMT400011092	Potato	cytosol	38.34	39.15
OQU76929	Sorghum	nucleus	47.15	37.4
PGSC0003DMT400073941	Potato	cytosol	35.92	36.75
PGSC0003DMT400071458	Potato	nucleus	38.51	34.63
PGSC0003DMT400032406	Potato	nucleus	42.31	33.79
PGSC0003DMT400083223	Potato	cytosol	36.96	33.59
PGSC0003DMT400003634	Potato	plastid	37.82	33.03
PGSC0003DMT400034197	Potato	nucleus	38.34	32.94
PGSC0003DMT400063133	Potato	nucleus	38.69	32.28
PGSC0003DMT400047231	Potato	nucleus	39.72	32.08
PGSC0003DMT400015241	Potato	nucleus	27.98	32.02
PGSC0003DMT400040754	Potato	cytosol	29.71	31.97
PGSC0003DMT400076796	Potato	nucleus	37.31	31.86
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	35.58	31.69
PGSC0003DMT400064016	Potato	nucleus	38.69	30.73
PGSC0003DMT400004748	Potato	nucleus	0.86	3.31

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102591278	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CCH9	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400025069
PGSC:PGSC0003DMG400025069	EnsemblPlants:PGSC0003DMT400064516	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF221	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295AB9F	RefSeq:XP_006359060.1	SEG:seg	:	:	:

Description

Cell division protein kinase 7 [Source:PGSC_GENE;Acc:PGSC0003DMG400025069]

Coordinates

chr4:-:61117585..61121018

Molecular Weight (calculated)

65729.3 Da

IEP (calculated)

10.149

GRAVY (calculated)

-0.770

Length

579 amino acids

Sequence
(BLAST)

001: MGCVQAKPSM HSPPRGLEKL KLESGYVGRG EHVRPRRSTG QRPHELREKN AAGRRLSDAN RDTINERINL VITNEGEKKH TNENNDVDRK VTKTTRTTHE
101: EEELIDGWPK WLVDNIPREV LAGLVPKSAD SYEKIDKVGS GTYSNVYRAR DRDTGMIVAL KKVRFDTSEP ESIKFMAREI MILQQLDHPN IIKLEGLATS
201: RMHYSLYIVF EYMQSDLTSI ISRPDMRLSE AQIKCYMQQL LSGLQHCHER GILHRDIKGS NLLIDKNGML KIADFGLANH FNPEKKRPLT SRVVTLWYRA
301: PELLLGATDY GIGIDLWSAG CLMAEMFAGR PILPGRTEVE QLHKIFKLCG TPTEDYWRKT KLSTTFRPPY TYRSNKKEAF RHFPASSWRL LSVLLALNPA
401: NRGSAGSALQ DEFFSTSPLA CELSELPVVY KEDPVAALNL EKRRHKTRQR SQSQKERKKK VIDEEETKPD DVCSNEEPIK SRLSTVFRLL EPGSSSTTIT
501: TTTTTSTSSS TSKPTLKSQS PQSSPTSTES HPNSTTNIKN KPPLPNARRN RTNKYNNKDA MNRLSRAQRS QSSKDFSRS

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.