Factsheet for VIT_18s0072g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P02960_001	Banana	cytosol	46.34	54.6
VIT_05s0124g00500.t01	Wine grape	cytosol	48.7	49.88
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	55.56	49.68
Solyc04g071920.1.1	Tomato	nucleus	65.48	48.68
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	65.48	47.84
KRH35103	Soybean	nucleus	66.9	46.93
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	48.23	46.79
VIT_07s0031g01920.t01	Wine grape	cytosol, nucleus, plasma membrane, plastid	65.25	46.15
VIT_07s0141g00280.t01	Wine grape	cytosol	26.48	45.16
Os02t0304500-00	Rice	plastid	54.14	43.95
TraesCS7B01G345800.1	Wheat	nucleus	56.5	42.0
TraesCS7D01G435700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	56.03	41.36
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	56.5	41.07
VIT_05s0020g01890.t01	Wine grape	cytosol	55.79	41.04
VIT_17s0000g00620.t01	Wine grape	nucleus	53.66	38.67
EER88844	Sorghum	vacuole	48.23	35.92
VIT_18s0001g06780.t01	Wine grape	nucleus	53.19	33.78
OQU76929	Sorghum	nucleus	57.21	33.15
VIT_19s0014g02670.t01	Wine grape	nucleus	54.14	32.16
VIT_12s0035g01180.t01	Wine grape	nucleus	54.85	31.31
VIT_06s0009g01800.t01	Wine grape	nucleus	37.83	30.95
VIT_17s0000g06650.t01	Wine grape	plastid	48.46	29.88
VIT_14s0108g01270.t01	Wine grape	nucleus	47.04	27.95
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	21.99	20.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100853757	wikigene:100853757	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ProteinID:CCB44898
ProteinID:CCB44898.1	UniProt:F6GY62	EMBL:FN594968	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100853757	wikigene:LOC100853757	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF221	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00021086A3	ArrayExpress:VIT_18s0072g00140
EnsemblPlantsGene:VIT_18s0072g00140	EnsemblPlants:VIT_18s0072g00140.t01	RefSeq:XP_003634541	RefSeq:XP_003634541.1	SEG:seg	:

Description

No Description!

Coordinates

chr18:+:19179471..19182071

Molecular Weight (calculated)

47810.6 Da

IEP (calculated)

9.303

GRAVY (calculated)

-0.499

Length

423 amino acids

Sequence
(BLAST)

001: MNSPPRGLEK LKIDNGYVSK AAGRRSTGQR YPDKDSGRVL RPESGSNKVL FVSGDGGGEE KSINKEEKRD DGGSEVSHVK GKEIVDGWPN WLTDNIPKKA
101: LAGLVPRSAE SFEKLDKIGQ GTYSNVYKAR DKDTGKIVAL KKVRFETTEP ESVKFMAREI TILRELDHPN VIKLEGLVTS RMQYSLYLVF DFMQSDLARV
201: IACPERLTEP QIKCYMHQLL SGLQHCHERG ILHRDIKGSN LLIDKDGRLK IADFGLAKHF YPNRKHPLTS KVVTLWYRAP ELLLGATDYG VGIDLWSAGC
301: LLAEMFLGRP IMPGRTEVEQ IHRIFKLCGT PSEEYWKKLR MPTTFRPPQM YKPSLVEAFR DFPTSSLGLL STLLALDPSY RGSARSALQN EFFHTWPLAC
401: DLTGLPVIYK EDDEATQARE HRK

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.