Factsheet for Solyc04g071920.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	94.73	93.09
VIT_18s0072g00140.t01	Wine grape	cytosol	48.68	65.48
GSMUA_Achr6P02960_001	Banana	cytosol	36.91	58.5
Solyc04g051460.2.1	Tomato	cytosol	46.22	55.72
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	43.76	52.64
KRH35103	Soybean	nucleus	53.95	50.91
TraesCS7B01G345800.1	Wheat	nucleus	46.4	46.4
TraesCS7D01G435700.1	Wheat	cytosol, mitochondrion, nucleus, plastid	46.57	46.25
Os02t0304500-00	Rice	plastid	40.42	44.15
Solyc01g098160.2.1	Tomato	nucleus	40.77	40.35
Solyc01g067640.2.1	Tomato	nucleus	40.77	40.0
EER88844	Sorghum	vacuole	39.72	39.79
Solyc03g097690.2.1	Tomato	cytosol	39.19	39.05
OQU76929	Sorghum	nucleus	47.8	37.26
Solyc11g045610.1.1	Tomato	nucleus	39.19	34.84
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	39.37	34.09
Solyc07g063130.2.1	Tomato	plastid	42.88	33.8
Solyc07g053910.2.1	Tomato	nucleus, plastid	41.3	32.82
Solyc10g008280.2.1	Tomato	nucleus	39.19	32.79
Solyc03g115660.2.1	Tomato	nucleus	39.54	32.56
Solyc04g056280.2.1	Tomato	nucleus	28.82	32.03
Solyc06g073630.2.1	Tomato	nucleus	28.12	31.62
Solyc06g064660.2.1	Tomato	endoplasmic reticulum, plasma membrane	37.43	31.05
Solyc01g103350.2.1	Tomato	nucleus	39.89	31.01

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	UniProt:K4BTH9	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF221	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc04g071920.1	EnsemblPlants:Solyc04g071920.1.1	UniParc:UPI0002766C03
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:58940245..58942970

Molecular Weight (calculated)

64384.5 Da

IEP (calculated)

10.181

GRAVY (calculated)

-0.795

Length

569 amino acids

Sequence
(BLAST)

001: MGCVQAKASM HSPPRGLEKL KLESGYVGRG EHVRPRRSTG QRPHELIREK NAGGRRLSDA NRDTITHEGE KKQTNDVGRK ITKTTTTTHE EEELIDGWPK
101: WLVDNIPREV LAGLVPKSAD SYDKIDKIGS GTYSNVYRAR DRDTGMIVAL KKVRFDTSEP ESIKFMAREI MILQKLDHPN IIKLEGLATS RMHYSLYIVF
201: EYMQSDLTSI ISSPDRRLNE AQIKCYMQQL LSGLQHCHER GILHRDIKGS NLLIDKNGML KIADFGLANH FNPEKKRPLT SRVVTLWYRA PELLLGATDY
301: GIGIDLWSAG CLMAEMFAGR PILPGRTEVE QLHKIFKLCG TPTEDYWRKT KLSTTFRPPY TYRSNKKEAF RHFPASSWRL LSVLLALNPA NRGSAGSALQ
401: DEFFSTSPLA CELSELPVVY KEDPEAELKL ERRRHKTRQR SQSQKERKKK VIDEEETKPD DVGSNEEPIK SRLSTVFRQL EPGSSSTTIT TTTTTSTSSS
501: TSKPTEKSQS SQTSAESHPN STTNVKNKPP LPNARRSRAS KYSSNNNKDA MNRLSRAQRS QSSKDFSRS

Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.