Factsheet for Solyc10g008280.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034197	Potato	nucleus	93.68	94.51
Solyc07g053910.2.1	Tomato	nucleus, plastid	71.32	67.74
CDY54916	Canola	mitochondrion	27.21	56.06
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	41.18	53.13
Solyc07g063130.2.1	Tomato	plastid	55.15	51.94
KRH26956	Soybean	nucleus	53.09	51.87
KRH22379	Soybean	nucleus	53.53	51.78
KRH25594	Soybean	nucleus	52.79	51.65
KRH55951	Soybean	nucleus	52.5	51.29
Solyc01g098160.2.1	Tomato	nucleus	42.35	50.09
Solyc01g067640.2.1	Tomato	nucleus	42.65	50.0
Bra036018.1-P	Field mustard	nucleus	45.59	49.92
CDY14916	Canola	nucleus	45.59	49.92
CDY66485	Canola	nucleus	45.59	49.76
CDY13111	Canola	nucleus	44.41	49.19
Solyc11g045610.1.1	Tomato	nucleus	45.44	48.28
Solyc03g097690.2.1	Tomato	cytosol	40.44	48.16
CDY60604	Canola	nucleus	45.0	48.11
AT5G44290.3	Thale cress	nucleus	45.44	47.98
CDY33146	Canola	nucleus	45.0	47.89
CDY20858	Canola	nucleus	45.0	47.89
Bra027540.1-P	Field mustard	nucleus	44.56	47.42
CDY10826	Canola	nucleus	35.88	45.69
Solyc04g051460.2.1	Tomato	cytosol	31.62	45.55
AT4G22940.2	Thale cress	cytosol	35.88	43.57
Solyc06g064660.2.1	Tomato	endoplasmic reticulum, plasma membrane	43.82	43.44
Solyc01g103350.2.1	Tomato	nucleus	46.18	42.9
CDX89871	Canola	mitochondrion, nucleus	45.59	42.88
AT1G03740.1	Thale cress	nucleus	46.62	42.84
Bra015260.1-P	Field mustard	mitochondrion, nucleus	45.44	42.74
CDY18179	Canola	nucleus	45.44	41.59
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	40.0	41.4
Solyc03g115660.2.1	Tomato	nucleus	40.88	40.23
CDY41270	Canola	cytosol	33.24	40.14
Solyc04g071920.1.1	Tomato	nucleus	32.79	39.19
Solyc06g073630.2.1	Tomato	nucleus	27.94	37.55
Solyc04g056280.2.1	Tomato	nucleus	28.09	37.3
Bra013662.1-P	Field mustard	nucleus	35.15	33.29

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726
InterPro:IPR000719	UniProt:K4CY05	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF326	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g008280.2	EnsemblPlants:Solyc10g008280.2.1	UniParc:UPI000276B7AF	SEG:seg

Description

No Description!

Coordinates

chr10:-:2410792..2417679

Molecular Weight (calculated)

76025.5 Da

IEP (calculated)

9.815

GRAVY (calculated)

-0.618

Length

680 amino acids

Sequence
(BLAST)

001: MGCVCCKLSR QVKDRRDGQK KRELDKGVSA VSSKREKSFR VKEKLENGDI SVGSFDRKSN GSKRVGDNHR KKLEVFPNAM EGELIAAGWP SLLAAVAGEA
101: INGWIPRKAD TFEKLDKIGQ GTYSSVYKAR DLVNDKVVAL KRVRFEKMDP ESIRFMAREI VILRRLDHPN IIKLEGLIVS RTSCSLYLVF EYMEHDLTGL
201: AALPGIKFTE PQVKCYMQQL LSGLDHCHNR GVLHRDIKGS NLLIDNHGTL KIADFGLANF FDNQQSVPLT SRVVTLWYRP PELLLGASHY GTAVDLWSTG
301: CILGELYVAK PIMPGRTEVE QLHKIFKLCG SPTEDYWKKT KLSYSAVFKP IQPYKRSVGE RFKELPPSAV GLLETLLSID PALRGTAVGA LESEFFTTKP
401: FACDPSSLPT YPPSKEIDAK LREEEARRRG TTNGSKERQA VPAPARDANA KLASSMQRRQ SSSNPKSQSD RFNPSKEAVA RFPNDPPKPS QAVKETGKDQ
501: MENLSDRFSA KDHLDDLSET FSHSVPLALG VFGKKYDDIS IGPNRADLSD LVASRSVVSG DNRDRCVQLQ SAHQVERTAR LLDEHSTKQD QDQKYFKQNF
601: ASSHQFESGR TCTKEANLHD HSDKGNKIHY SGSLLVASNK VDQMLKDRDR HIQEAARRAR LEKARAGQAN APARSNVKNM

Best Arabidopsis Sequence Match ( AT1G53050.2 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.