CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015260.1-P	Field mustard	mitochondrion, nucleus	97.1	97.1
CDY18179	Canola	nucleus	94.74	92.19
AT1G03740.1	Thale cress	nucleus	80.5	78.65
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	50.35	69.07
CDY54916	Canola	mitochondrion	31.12	68.18
CDY13111	Canola	nucleus	57.26	67.43
CDY14916	Canola	nucleus	57.54	66.99
CDY66485	Canola	nucleus	57.68	66.93
CDY60604	Canola	nucleus	58.37	66.35
CDY33146	Canola	nucleus	58.51	66.2
CDY20858	Canola	nucleus	58.51	66.2
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	22.55	59.06
CDY71137	Canola	plastid	31.95	52.98
CDY67158	Canola	plastid	37.48	47.88
CDX95237	Canola	nucleus	37.62	47.64
CDY02525	Canola	plastid	43.02	47.12
CDY25738	Canola	nucleus, plastid	42.88	47.04
CDY10826	Canola	nucleus	34.58	46.82
KRH55951	Soybean	nucleus	44.26	45.98
KRH25594	Soybean	nucleus	43.98	45.76
CDY25881	Canola	plastid	43.15	45.75
Solyc07g053910.2.1	Tomato	nucleus, plastid	45.23	45.67
CDY48795	Canola	nucleus	32.37	45.61
Solyc10g008280.2.1	Tomato	nucleus	42.88	45.59
PGSC0003DMT400034197	Potato	nucleus	42.46	45.55
PGSC0003DMT400047231	Potato	nucleus	44.81	45.19
CDY50511	Canola	nucleus, plastid	43.15	45.15
CDX86178	Canola	cytosol, nucleus, plastid	35.27	45.13
KRH26956	Soybean	nucleus	43.29	44.97
CDX80672	Canola	cytosol, plastid	35.55	44.93
CDY45813	Canola	cytosol	35.41	44.68
CDX71637	Canola	cytosol	35.68	44.48
CDY05828	Canola	cytosol	35.68	44.41
KRH22379	Soybean	nucleus	43.15	44.38
CDX99520	Canola	nucleus	37.07	43.65
CDX86879	Canola	nucleus	37.07	43.44
CDY18783	Canola	plastid	34.72	43.43
CDY58380	Canola	nucleus	34.99	43.17
CDX84882	Canola	cytosol	35.27	42.86
CDY53230	Canola	nucleus, plastid	34.44	42.64
CDY72385	Canola	cytosol	9.82	42.26
CDX68307	Canola	plastid	35.96	42.14
CDY70577	Canola	nucleus	36.24	41.85
CDY70545	Canola	nucleus	36.1	41.69
CDY27801	Canola	cytosol	33.61	41.68
CDY36688	Canola	plastid	35.55	41.65
CDY41930	Canola	cytosol	33.75	41.57
CDX93496	Canola	nucleus	38.59	41.33
CDX93753	Canola	nucleus	35.55	41.19
CDY31076	Canola	nucleus	35.96	41.14
CDY15287	Canola	nucleus	35.13	41.1
CDX96330	Canola	plastid	36.1	41.04
CDX72813	Canola	plastid	35.96	40.88
CDY53144	Canola	nucleus	37.9	40.83
CDY29169	Canola	nucleus	37.34	40.72
CDY39924	Canola	nucleus	37.21	40.57
CDY31800	Canola	nucleus	37.9	40.35
CDY03697	Canola	nucleus, plastid	36.1	40.22
CDY67268	Canola	nucleus, plastid	35.82	39.85
CDY41270	Canola	cytosol	30.98	39.79
CDY20686	Canola	nucleus	35.82	39.42
CDX73077	Canola	cytosol	33.33	37.72
CDX96534	Canola	cytosol	33.2	37.56
CDX81891	Canola	plastid	35.68	36.96
CDX96988	Canola	nucleus	25.59	36.35
CDY56227	Canola	nucleus	25.59	36.27
CDX69849	Canola	nucleus	25.45	36.15
CDY37004	Canola	nucleus	32.37	36.0
CDX74282	Canola	plastid	30.98	35.96
CDX83825	Canola	plastid	34.72	35.76
CDY18101	Canola	cytosol	22.68	35.57
CDY08835	Canola	cytosol	21.02	35.51
CDY34698	Canola	plastid	30.29	34.82
CDY33994	Canola	nucleus	24.9	34.82
CDY31293	Canola	nucleus	24.76	34.56
CDX74463	Canola	nucleus	29.32	34.53
CDY55799	Canola	plastid	29.88	34.45
CDX96706	Canola	nucleus	34.58	33.74
CDY22631	Canola	mitochondrion	37.21	32.29
CDY06363	Canola	mitochondrion	37.07	32.1
CDY50891	Canola	nucleus, plastid	38.73	29.26
CDX67429	Canola	cytosol, plastid	32.23	25.11
CDY14526	Canola	cytosol	23.1	23.26
CDX91965	Canola	nucleus	30.71	21.43
CDY37546	Canola	nucleus	30.57	21.13
CDY43266	Canola	nucleus	28.08	19.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:A0A078DKU9	EnsemblPlants:CDX89871	ProteinID:CDX89871
ProteinID:CDX89871.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00150337001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF326	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EDBEF4	SEG:seg	:	:	:	:

Description

BnaA10g02110D

Coordinates

chrLK031861:-:476776..480021

Molecular Weight (calculated)

82719.8 Da

IEP (calculated)

9.724

GRAVY (calculated)

-0.689

Length

723 amino acids

Sequence
(BLAST)

001: MGCVSSKQRP FRRKSTLASE KRSSRFDSSR RVDEWIQPQV VFDRSSSKRD AKDSKLIESE MLSSNRFCDH QVEKILENPQ LAVHDQELRK VPCPVVKPGI
101: EPKLDRWNSI DSKVRLIEFE KLSSKRLSDH HQIDKEPEVQ AVVPQELRKN LSVAAAPKDT ELKQVVSAGW PTWLVSVAGE ALVDWAPRRA STFEKLEKIG
201: QGTYSSVYRA RDLTHDKIVA LKKVRFDLND IESVKFMARE IIVMRRLDHP NVLKLEGLIT APVSSSLYLV FDYMDHDLVG LSSLPGVKFT EPQVKCYMRQ
301: LLSGLEHCHS RGVLHRDIKG SNLLIDGNGV LKIADFGLAT FFDPKARTVA LTSHVVTLWY RPPELLLGAS HYGVGVDLWS TGCILGELYA GKPILPGKTE
401: VEQLHKIFKL CGSPTESYWR KHNLPSSAGF RTAIPYRRKL SEMYKDFPES VLLLLETLLS IDPDHRSSAS SALESEYFKT KPLACDPFCL PKYPPSKEID
501: AKLRDEEKRQ RPEKQERQDS QGRRSHERKA IPPIRANHSL SMSMDKPYLD LKSRNDSFKS FKEERASHGP VPDYQNMQTR NNQSGERVSY SGPLMINRNV
601: AKSTMYVKET APPPRYPPSR VNPRVLSGSV SSKALLDQPV MNQRRRDRRA YTRADTMDSR HMTIPIDPSW YNPSDSKIYT SGPLLEQPSR VDQMLEEHDR
701: QLQEFSRQEQ KTREDKTDKR EQS

Best Arabidopsis Sequence Match ( AT1G03740.1 )
(BLAST)

001: MGCVNSRHRP FRRKSTTLKE SSEEKRSSRI DSSRRIDDWI QPEDGFDRLS NSGDAKVRLI ESEMFSTSRC HDHQIGKILE NPATVAHMDR VVHDQELRRA
101: SSAVVDSDLD IDPKVVKAKL DRWNSKDSKV RLIESEKLSS SMFSEHHQIE KGVEKPEVEA SVRVVHRELK RGSSIVSPKD AERKQVAAGW PSWLVSVAGE
201: SLVDWAPRRA NTFEKLEKIG QGTYSSVYRA RDLLHNKIVA LKKVRFDLND MESVKFMARE IIVMRRLDHP NVLKLEGLIT APVSSSLYLV FEYMDHDLLG
301: LSSLPGVKFT EPQVKCYMRQ LLSGLEHCHS RGVLHRDIKG SNLLIDSKGV LKIADFGLAT FFDPAKSVSL TSHVVTLWYR PPELLLGASH YGVGVDLWST
401: GCILGELYAG KPILPGKTEV EQLHKIFKLC GSPTENYWRK QKLPSSAGFK TAIPYRRKVS EMFKDFPASV LSLLETLLSI DPDHRSSADR ALESEYFKTK
501: PFACDPSNLP KYPPSKEIDA KMRDEAKRQQ PMRAEKQERQ DSMTRISHER KFVPPVKANN SLSMTMEKQY KDLRSRNDSF KSFKEERTPH GPVPDYQNMQ
601: HNRNNQTGVR ISHSGPLMSN RNMAKSTMHV KENALPRYPP ARVNPKMLSG SVSSKTLLER QDQPVTNQRR RDRRAYNRAD TMDSRHMTAP IDPSWYNPSD
701: SKIYMSGPLL AQPSRVDQML EEHDRQLQEF NRQALKTPQG

Arabidopsis Description

F21B7.34 [Source:UniProtKB/TrEMBL;Acc:Q9LR53]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.