CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02525	Canola	plastid	98.79	98.64
CDY25881	Canola	plastid	90.9	87.83
AT1G53050.1	Thale cress	nucleus, plastid	91.96	87.32
CDY50511	Canola	nucleus, plastid	90.44	86.25
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	28.83	68.84
VIT_05s0124g00500.t01	Wine grape	cytosol	43.1	68.77
VIT_19s0014g02670.t01	Wine grape	nucleus	73.14	67.7
KRH22087	Soybean	nucleus	72.99	67.56
KRH27243	Soybean	nucleus	72.53	67.51
KRH55283	Soybean	nucleus	72.53	67.32
PGSC0003DMT400032406	Potato	nucleus	73.9	67.17
Solyc07g063130.2.1	Tomato	plastid	73.44	67.04
KRH26151	Soybean	nucleus	72.84	65.66
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	43.25	65.37
GSMUA_Achr10P...	Banana	nucleus	65.71	57.66
CDY71137	Canola	plastid	37.94	57.34
CDY54916	Canola	mitochondrion	28.07	56.06
HORVU3Hr1G026900.7	Barley	cytosol	58.12	55.99
EES02288	Sorghum	cytosol	58.73	55.92
TraesCS3D01G141000.1	Wheat	cytosol	58.12	55.91
TraesCS3B01G158600.1	Wheat	cytosol	57.97	55.77
TraesCS3A01G313300.1	Wheat	cytosol	57.66	55.31
Zm00001d008874_P002	Maize	nucleus	58.12	54.95
Zm00001d039425_P003	Maize	nucleus	57.81	53.81
CDY67158	Canola	plastid	45.83	53.36
CDX95237	Canola	nucleus	45.98	53.06
CDX71637	Canola	cytosol	45.83	52.07
CDY05828	Canola	cytosol	45.83	51.98
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	41.43	51.8
CDY48795	Canola	nucleus	40.21	51.66
CDY45813	Canola	cytosol	44.46	51.13
CDX86879	Canola	nucleus	46.89	50.08
CDX99520	Canola	nucleus	46.59	50.0
CDY58380	Canola	nucleus	44.31	49.83
CDX84882	Canola	cytosol	44.61	49.41
CDY18783	Canola	plastid	43.25	49.31
CDY13111	Canola	nucleus	45.68	49.02
CDX68307	Canola	plastid	45.83	48.95
CDX96330	Canola	plastid	47.04	48.74
CDX93496	Canola	nucleus	49.92	48.74
CDY14916	Canola	nucleus	45.83	48.63
CDY53230	Canola	nucleus, plastid	43.1	48.63
CDY36688	Canola	plastid	45.52	48.62
CDX72813	Canola	plastid	46.74	48.43
CDY15287	Canola	nucleus	45.37	48.38
CDY66485	Canola	nucleus	45.68	48.31
CDX93753	Canola	nucleus	45.68	48.24
CDX86178	Canola	cytosol, nucleus, plastid	41.27	48.14
CDY03697	Canola	nucleus, plastid	47.34	48.07
CDY70577	Canola	nucleus	45.52	47.92
CDX80672	Canola	cytosol, plastid	41.58	47.9
CDY67268	Canola	nucleus, plastid	47.19	47.85
CDY39924	Canola	nucleus	48.1	47.81
CDY29169	Canola	nucleus	48.1	47.81
CDY70545	Canola	nucleus	45.37	47.76
CDY60604	Canola	nucleus	45.68	47.33
CDY31076	Canola	nucleus	45.37	47.31
CDY10826	Canola	nucleus	38.24	47.19
CDY20858	Canola	nucleus	45.68	47.1
CDY33146	Canola	nucleus	45.68	47.1
CDY53144	Canola	nucleus	47.95	47.09
CDY41930	Canola	cytosol	41.73	46.85
CDY27801	Canola	cytosol	41.43	46.83
CDY31800	Canola	nucleus	48.1	46.69
CDY20686	Canola	nucleus	44.92	45.05
CDX89871	Canola	mitochondrion, nucleus	47.04	42.88
CDY72385	Canola	cytosol	10.93	42.86
CDY18179	Canola	nucleus	47.04	41.72
CDX73077	Canola	cytosol	40.21	41.47
CDX81891	Canola	plastid	43.7	41.26
CDX96534	Canola	cytosol	39.91	41.16
CDX83825	Canola	plastid	43.1	40.46
CDY41270	Canola	cytosol	34.45	40.32
CDY37004	Canola	nucleus	39.15	39.69
CDX69849	Canola	nucleus	30.65	39.69
CDX96988	Canola	nucleus	30.65	39.69
CDX74282	Canola	plastid	36.42	38.52
CDX96706	Canola	nucleus	43.25	38.46
CDY08835	Canola	cytosol	24.89	38.32
CDY56227	Canola	nucleus	29.59	38.24
CDY22631	Canola	mitochondrion	48.1	38.06
CDX74463	Canola	nucleus	35.36	37.95
CDY33994	Canola	nucleus	29.74	37.91
CDY55799	Canola	plastid	35.96	37.8
CDY06363	Canola	mitochondrion	47.8	37.72
CDY34698	Canola	plastid	35.96	37.68
CDY31293	Canola	nucleus	29.59	37.64
CDY18101	Canola	cytosol	26.1	37.31
CDY50891	Canola	nucleus, plastid	50.23	34.59
CDX67429	Canola	cytosol, plastid	39.3	27.91
CDY14526	Canola	cytosol	27.47	25.21
CDX91965	Canola	nucleus	37.33	23.75
CDY37546	Canola	nucleus	37.18	23.42
CDY43266	Canola	nucleus	34.9	21.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:A0A078GMA2	UniProt:A0A078GMA2	EnsemblPlants:CDY25738
ProteinID:CDY25738	ProteinID:CDY25738.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00033116001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF204	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEDCD8	SEG:seg	:	:	:	:

Description

BnaC03g69370DBnaC03g69370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMA2]

Coordinates

chrLK032179:-:578839..581993

Molecular Weight (calculated)

74057.0 Da

IEP (calculated)

10.035

GRAVY (calculated)

-0.713

Length

659 amino acids

Sequence
(BLAST)

001: MGCVWCKPSA IEDSPKERLS IKPSSEIRVT RPVGSSRREE SVRTKERSDV VSVVRPVLSN SSRREKKLEN VATPHFPIAK AAEGEYVAAG WPPWLASVAG
101: EAIKGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLNQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV TSRMSCSLYL VFEYMEHDLA
201: GLASHPAVKF SESQVKCYLQ QLLSGLDHCH GRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY RPPELLLGAT RYGAAVDLWS
301: TGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPSEEYWV KSRLPHATIF KPTQPYKRVV DETFKEFPQP ALALLETLLS INPDDRGTAT SALHSEFFTT
401: RPLPCDPSSL PKYPPSKELD ARMRDEESRR QGGGNREQRH QERRGTKESR AIPAPEANAE LVTSMQKRQS QSSTNRSRSE KFNPHPEEVA SGFPIDPPRP
501: SSQAFEPNRE SQGNIVLPPH KRASHSGPLT RRSASAKGRR TYQDPQKVSL QQETCRGMTR LPGSFKEVSE EANQEENGRS NKKDPILLGY GSKGHKIHYS
601: GPLVVPSGNM DQVLKDHDRH IQEAVRRARI DKARVRKHQA EEDSSQQVST NHPSSVSSR

Best Arabidopsis Sequence Match ( AT1G53050.2 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.