CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008874_P002	Maize	nucleus	95.52	94.83
Zm00001d039425_P003	Maize	nucleus	95.81	93.64
HORVU3Hr1G026900.7	Barley	cytosol	84.1	85.09
TraesCS3A01G313300.1	Wheat	cytosol	84.39	85.01
TraesCS3D01G141000.1	Wheat	cytosol	84.1	84.96
TraesCS3B01G158600.1	Wheat	cytosol	84.1	84.96
VIT_05s0124g00500.t01	Wine grape	cytosol	39.6	66.34
VIT_04s0079g00700.t01	Wine grape	cytosol, plastid	39.74	63.07
KXG32500	Sorghum	plastid	47.83	59.43
KRH27243	Soybean	nucleus	60.12	58.76
CDY25738	Canola	nucleus, plastid	55.92	58.73
OQU92600	Sorghum	nucleus	47.83	58.69
CDY02525	Canola	plastid	55.92	58.64
Bra030962.1-P	Field mustard	plastid	55.78	58.57
KRH22087	Soybean	nucleus	60.12	58.43
Bra038097.1-P	Field mustard	plastid	57.37	58.21
CDY25881	Canola	plastid	57.37	58.21
KRH55283	Soybean	nucleus	59.68	58.17
VIT_19s0014g02670.t01	Wine grape	nucleus	59.25	57.58
PGSC0003DMT400032406	Potato	nucleus	60.26	57.52
Solyc07g063130.2.1	Tomato	plastid	59.97	57.48
AT1G53050.1	Thale cress	nucleus, plastid	57.37	57.2
CDY50511	Canola	nucleus, plastid	57.08	57.16
KXG36890	Sorghum	plastid	46.97	56.82
GSMUA_Achr10P...	Banana	nucleus	61.56	56.72
KRH26151	Soybean	nucleus	58.67	55.54
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	35.84	55.23
EES15821	Sorghum	mitochondrion	43.79	46.9
KXG24243	Sorghum	nucleus	50.87	46.75
EES05258	Sorghum	nucleus	45.52	45.32
EES04133	Sorghum	cytosol, plasma membrane, plastid	35.69	44.34
OQU90194	Sorghum	plastid	43.93	42.94
EES15089	Sorghum	cytosol	19.8	42.41
KXG23797	Sorghum	plastid	41.04	40.4
EER93534	Sorghum	cytosol	29.62	40.04
EES18167	Sorghum	nucleus	29.19	39.15
EER88844	Sorghum	vacuole	28.32	34.51
OQU76929	Sorghum	nucleus	32.8	31.1

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EntrezGene:8084325	UniProt:C5XL94	EnsemblPlants:EES02288
ProteinID:EES02288	ProteinID:EES02288.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF204	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3003G027800	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A84F02	RefSeq:XP_002457168.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:2449323..2454877

Molecular Weight (calculated)

77410.1 Da

IEP (calculated)

9.901

GRAVY (calculated)

-0.640

Length

692 amino acids

Sequence
(BLAST)

001: MGCVCGRPSA FDDGQCRATP PPAAKLSAVV RREEEARKQQ LQLQQHARAG SGREEALERR RAMMAMAAAC QVRSPVPRAV EAEQVAVGWP PWLVAVAPEA
101: VRGWVPRRAE SFEKLDKIGQ GTYSNVYRAR DLEKQKIVAL KKVRFDNLEP ESVKFMAREI LILRRLDHPN VIKLEGLVTS RMSCSLYLVF EYMEHDLAGL
201: ASFPGVKFTE SQVKCYMQQL LRGLEHCHSR HILHRDIKGS NLLIDNRGIL KIADFGLASF FDPEQRHPLT SRVVTLWYRP PELLLGATNY GVSVDLWSAG
301: CILAELYAGK PIMPGRTEVE QLHKIFKLCG SPSEDYWRKS KLPHATIFKP QHPYARRVPE TFKEFPAPAL ALVDILLSVD PADRGTASSA LQSEFFTTKP
401: YACNPSSLPR YPPSKEFDAK RREEEARRQG VTGGKQHKHD PERRTRESRA VPAPDANAEL VSSLQKRQAQ TNTRSRSEMF NPCKEDSASG FRIEPPRPTP
501: VTESSEDPQR AYPTRIFHSG PLVNQSQPSK AGGGKNGELQ VPGVANHPVL VSTRSGLRTD DSSRTMVAQA EAFAHGRRLS ESINEHFSNS GKYDQVFPKK
601: DERNSRADGA IGYGSKGNKI HHSGPLTCPS GNVDEMLKEN DRQIQEVFRR TRVEKSRARR DHGHHQGGIR PGDFGAIPVF PSSRSSYQAI QQ

Best Arabidopsis Sequence Match ( AT1G53050.2 )
(BLAST)

001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR

Arabidopsis Description

F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.