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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d048994_P003 Maize vacuole 88.2 59.82
CDX94278 Canola cytosol, mitochondrion, nucleus, plasma membrane 36.3 59.06
Os11t0242500-01 Rice mitochondrion 70.82 54.92
TraesCS4A01G227200.2 Wheat mitochondrion 69.27 48.14
TraesCS4D01G086800.1 Wheat mitochondrion 67.26 47.71
HORVU4Hr1G015320.4 Barley mitochondrion 67.04 46.59
TraesCS4B01G089100.3 Wheat mitochondrion 68.37 44.56
OQU92600 Sorghum nucleus 55.68 44.33
KXG32500 Sorghum plastid 54.34 43.81
KXG36890 Sorghum plastid 54.79 43.01
EES15821 Sorghum mitochondrion 61.69 42.88
EES15089 Sorghum cytosol 30.07 41.8
CDY48795 Canola nucleus 47.22 41.33
GSMUA_Achr6P07440_001 Banana cytosol 57.24 41.19
GSMUA_Achr6P28920_001 Banana plastid 59.47 40.21
Solyc11g045610.1.1 Tomato nucleus 55.01 38.59
PGSC0003DMT400071458 Potato nucleus 55.23 38.51
AT1G33770.1 Thale cress nucleus 52.34 38.27
CDX86879 Canola nucleus 52.56 38.25
Bra037899.1-P Field mustard nucleus 52.56 38.25
GSMUA_Achr2P05620_001 Banana cytosol 57.24 38.19
CDX99520 Canola nucleus 52.12 38.11
CDX68307 Canola plastid 52.12 37.93
EES04133 Sorghum cytosol, plasma membrane, plastid 46.99 37.88
CDY36688 Canola plastid 51.89 37.76
Bra003921.1-P Field mustard plastid 52.12 37.62
KRH27807 Soybean nucleus 51.89 37.4
CDY15287 Canola nucleus 51.45 37.38
CDY58380 Canola nucleus 48.78 37.37
CDX93753 Canola nucleus 51.89 37.34
Bra028011.1-P Field mustard nucleus 51.89 37.28
CDX72813 Canola plastid 52.78 37.26
CDX96330 Canola plastid 52.56 37.11
Bra016132.1-P Field mustard plastid 52.56 37.11
VIT_18s0001g06780.t01 Wine grape nucleus 55.01 37.09
Bra010213.1-P Field mustard nucleus 51.67 37.06
CDY70577 Canola nucleus 51.67 37.06
CDY70545 Canola nucleus 51.67 37.06
GSMUA_Achr5P16890_001 Banana nucleus 57.02 37.05
PGSC0003DMT400083223 Potato cytosol 52.34 36.89
KRH77684 Soybean nucleus 51.89 36.75
CDY31076 Canola nucleus 51.67 36.71
AT4G10010.2 Thale cress nucleus 52.78 36.52
KRH06043 Soybean nucleus 47.22 36.49
EES05258 Sorghum nucleus 56.12 36.26
Bra007973.1-P Field mustard nucleus, plastid 52.12 36.22
CDY03697 Canola nucleus, plastid 52.12 36.06
AT1G71530.1 Thale cress plastid 52.34 35.88
EES02288 Sorghum cytosol 55.23 35.84
Bra030788.1-P Field mustard nucleus 51.45 35.76
CDY67268 Canola nucleus, plastid 51.67 35.69
CDX93496 Canola nucleus 53.01 35.26
CDY29169 Canola nucleus 51.89 35.14
CDY20686 Canola nucleus 51.22 35.01
CDY39924 Canola nucleus 51.67 34.99
Bra027895.1-P Field mustard nucleus 51.67 34.94
KXG24243 Sorghum nucleus 58.13 34.66
CDY53144 Canola nucleus 51.67 34.58
Solyc06g064660.2.1 Tomato endoplasmic reticulum, plasma membrane 52.78 34.55
KRH26282 Soybean nucleus 54.34 34.41
EER93534 Sorghum cytosol 38.98 34.18
CDY31800 Canola nucleus 51.45 34.02
Bra031674.1-P Field mustard nucleus 52.34 33.86
VIT_12s0035g01180.t01 Wine grape nucleus 55.46 33.6
AT1G57700.1 Thale cress nucleus 51.67 33.53
Solyc01g103350.2.1 Tomato nucleus 53.9 33.06
PGSC0003DMT400064016 Potato nucleus 53.67 33.06
AT1G09600.1 Thale cress nucleus 52.56 33.05
OQU90194 Sorghum plastid 52.12 33.05
Bra035472.1-P Field mustard nucleus 51.45 32.91
EES18167 Sorghum nucleus 37.19 32.36
Bra020008.1-P Field mustard nucleus 53.23 31.7
KXG23797 Sorghum plastid 49.44 31.58
EER88844 Sorghum vacuole 39.64 31.34
CDY22631 Canola mitochondrion 52.78 28.45
CDY06363 Canola mitochondrion 52.56 28.26
GSMUA_Achr9P08070_001 Banana nucleus 58.13 27.53
GSMUA_Achr6P17460_001 Banana cytosol 57.02 27.21
OQU76929 Sorghum nucleus 43.43 26.71
CDY50891 Canola nucleus, plastid 53.01 24.87
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.1.8Gene3D:3.30.200.20UniProt:A0A1Z5RHM6GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlants:OQU83167ProteinID:OQU83167ProteinID:OQU83167.1
PFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF225
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3005G087300SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI000B8B9FA7SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:-:12303336..12306438
Molecular Weight (calculated)
49889.2 Da
IEP (calculated)
9.598
GRAVY (calculated)
-0.260
Length
449 amino acids
Sequence
(BLAST)
001: MHHRLKIWIS SGHNGIIGKY GSKLELGVPH AVRPLSDEHA KPGWPDWLIN VAPEAVQGWF PRRADSFEKL DKVGQGTYSS VYKARDLKTG KFVALKKVRF
101: LNVDPESVRF MAREILILRK LNHPNIIKLQ GIITSSFSQS LYLVFEYMEH DLVGLAATTG LKFTEPQVKC LFQQLLSGLD HCHSNGVLHR DLKSSNLLMD
201: NNGVLKIADF GLATSFDPDN QQPLTSRVAT LWYRPPELLL GATKYGPSVD LWSAGCILAE LLAGKPILPG RTEVEQLHKI FKLCGSPSGD YWSKLEVPQT
301: GMFKPSRQYR VCIADTFKDF PQSAVVLLDN LLALQPDSRG TAAEALRSDF FRKKPLACSP SSLPKCPPSK EYDVRLGREE ARRKRKAAES VSGFRSVETE
401: DGNSFASEIT KVAMIRPESA DVRNEVLGSQ NSNLGSKGPV VVSTVLLKY
Best Arabidopsis Sequence Match ( AT1G53050.1 )
(BLAST)
001: MGCVCGKPSA IEDSKDSPRE RFSSKSSSEF RVSRPVASSR REEPLRIKER SDVVSVRPVL SNKQSNVSLH LRGENLSRRE KRIENVAATS PLAMSITIAK
101: ATEGEYVAAG WPPWLASVAG EAIRGWVPRR ADSFEKLDKI GQGTYSNVYR ARDLDQKKIV ALKKVRFDNL EPESVRFMAR EIQILRRLDH PNIIKLEGLV
201: TSRMSCSLYL VFEYMEHDLA GLASHPAIKF SESQVKCYLQ QLLHGLDHCH SRGVLHRDIK GSNLLIDNSG VLKIADFGLA SFFDPRQTQP LTSRVVTLWY
301: RPPELLLGAT RYGAAVDLWS AGCILAELYA GKPIMPGRTE VEQLHKIFKL CGSPTEDYWV KSRLPHATIF KPTQPYKRLV GETFKEFPQP ALALLETLLS
401: VNPDDRGTAT AALKSEFFST RPLPCDPSSL PKYPPSKELD ARMRDEESRR QVGGNRDQRH QERRGTKESR AIPAPDANAE LVASMQKRQS QSTNRSRSEK
501: FNPHPEEVAS GFPIDPPRPS SQAFEPNRES QGNIIPHKRA SHSGPLSRRS ASAKGRRNYQ DSQKVSSIAD YSAMPGFAAT RTGAPQQETC RGMTRLPGSF
601: KETSEEANQE ENGRSNKKDP ILLGYGSKGH KIHYSGPLVV PSGNMDQVLK DHDRHIQEAV RRARIDKARV KKLQADEASS QQVATNHPSS VSSR
Arabidopsis Description
F8L10.9 protein [Source:UniProtKB/TrEMBL;Acc:Q9LNN0]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.