CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77684	Soybean	nucleus	89.09	87.54
Zm00001d002645_P001	Maize	cytosol	27.29	71.43
HORVU5Hr1G035950.2	Barley	cytosol	29.86	68.13
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	30.02	67.75
CDY48795	Canola	nucleus	44.3	53.8
KRH21021	Soybean	cytosol	46.07	53.15
KRH11268	Soybean	cytosol	45.91	52.87
KRH02197	Soybean	nucleus	45.59	52.01
AT1G33770.1	Thale cress	nucleus	51.2	51.95
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	37.4	51.89
KRH50926	Soybean	nucleus	45.43	51.64
Bra037899.1-P	Field mustard	nucleus	50.4	50.89
CDX86879	Canola	nucleus	50.24	50.73
CDY70545	Canola	nucleus	50.72	50.48
CDY15287	Canola	nucleus	49.92	50.32
Bra010213.1-P	Field mustard	nucleus	50.56	50.32
CDY70577	Canola	nucleus	50.56	50.32
Solyc11g045610.1.1	Tomato	nucleus	51.69	50.31
CDX99520	Canola	nucleus	49.44	50.16
PGSC0003DMT400071458	Potato	nucleus	51.52	49.84
CDX93753	Canola	nucleus	49.92	49.84
Bra028011.1-P	Field mustard	nucleus	49.92	49.76
VIT_18s0001g06780.t01	Wine grape	nucleus	53.13	49.7
KRH34013	Soybean	nucleus	45.91	49.31
GSMUA_Achr10P...	Banana	cytosol	39.0	48.89
AT4G10010.2	Thale cress	nucleus	50.72	48.69
PGSC0003DMT400083223	Potato	cytosol	49.6	48.51
KRG96918	Soybean	cytosol	44.3	48.25
GSMUA_Achr6P07440_001	Banana	cytosol	48.15	48.08
KRG92786	Soybean	nucleus	44.62	47.93
KRH68662	Soybean	nucleus	45.1	47.47
KRH54127	Soybean	mitochondrion	42.22	47.05
CDX68307	Canola	plastid	46.55	47.0
Bra016132.1-P	Field mustard	plastid	47.83	46.86
CDX96330	Canola	plastid	47.83	46.86
Bra003921.1-P	Field mustard	plastid	46.71	46.78
CDX72813	Canola	plastid	47.67	46.7
CDY36688	Canola	plastid	46.23	46.68
KRH59775	Soybean	nucleus	41.41	46.49
Bra007973.1-P	Field mustard	nucleus, plastid	47.67	45.98
KRH41090	Soybean	cytosol	40.93	45.95
EES15821	Sorghum	mitochondrion	47.35	45.67
CDY03697	Canola	nucleus, plastid	47.51	45.61
CDY67268	Canola	nucleus, plastid	47.51	45.54
GSMUA_Achr6P28920_001	Banana	plastid	48.48	45.48
Solyc06g064660.2.1	Tomato	endoplasmic reticulum, plasma membrane	50.08	45.48
KRH63826	Soybean	cytosol	26.48	45.21
AT1G71530.1	Thale cress	plastid	47.51	45.19
KRH06043	Soybean	nucleus	41.89	44.92
GSMUA_Achr2P05620_001	Banana	cytosol	48.15	44.58
TraesCS5A01G110100.1	Wheat	endoplasmic reticulum, plasma membrane	46.07	44.09
KRH27243	Soybean	nucleus	50.08	44.07
GSMUA_Achr5P16890_001	Banana	nucleus	48.64	43.85
TraesCS5D01G118300.1	Wheat	endoplasmic reticulum, plasma membrane	45.75	43.78
KRH53817	Soybean	nucleus	34.51	43.7
KRH55283	Soybean	nucleus	49.76	43.66
GSMUA_Achr8P08480_001	Banana	nucleus	46.23	43.57
KRH22087	Soybean	nucleus	49.76	43.54
TraesCS6D01G184000.1	Wheat	cytosol, nucleus, peroxisome	48.48	43.52
KRH26282	Soybean	nucleus	49.28	43.3
Os11t0242500-01	Rice	mitochondrion	40.13	43.18
TraesCS4D01G086800.1	Wheat	mitochondrion	43.66	42.97
Zm00001d023945_P003	Maize	mitochondrion	46.87	42.94
KRH59494	Soybean	nucleus	28.73	42.93
EES05258	Sorghum	nucleus	47.83	42.88
KRH64126	Soybean	nucleus	34.35	42.8
HORVU6Hr1G046160.12	Barley	nucleus	47.83	42.57
TraesCS6B01G231200.2	Wheat	cytosol	47.35	42.32
HORVU4Hr1G015320.4	Barley	mitochondrion	43.82	42.26
Zm00001d016846_P002	Maize	cytosol	47.67	42.13
KRH26151	Soybean	nucleus	49.28	42.0
TraesCS4A01G227200.2	Wheat	mitochondrion	43.5	41.95
TraesCS6A01G192900.2	Wheat	nucleus	47.99	41.53
Os08t0112500-01	Rice	nucleus	49.44	41.18
TraesCS7D01G316100.1	Wheat	nucleus	48.8	40.92
KXG24243	Sorghum	nucleus	49.44	40.9
TraesCS7A01G319500.1	Wheat	nucleus	48.64	40.78
HORVU7Hr1G076360.30	Barley	nucleus	48.48	40.65
TraesCS7B01G220500.1	Wheat	nucleus	48.48	40.65
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	30.82	40.59
Zm00001d035050_P002	Maize	nucleus	48.48	40.11
KRG93581	Soybean	plastid	37.72	40.1
KRH25594	Soybean	nucleus	44.62	40.0
KRH55951	Soybean	nucleus	44.62	39.94
Zm00001d049698_P003	Maize	nucleus	49.28	39.92
KRH18441	Soybean	nucleus	37.4	39.69
Os02t0559300-02	Rice	plasma membrane	46.39	39.64
TraesCS4B01G089100.3	Wheat	mitochondrion	43.66	39.48
KRH54601	Soybean	plastid	42.38	38.88
KRH56877	Soybean	nucleus, plastid	41.57	38.66
Zm00001d048994_P003	Maize	vacuole	40.93	38.52
KRH26956	Soybean	nucleus	43.02	38.51
KRH03527	Soybean	nucleus, plastid	41.73	38.29
KRH63286	Soybean	nucleus	41.25	38.13
KRH22379	Soybean	nucleus	42.7	37.84
KRH14656	Soybean	nucleus	30.66	37.02
KRH73489	Soybean	nucleus	30.66	37.02
KRG89779	Soybean	nucleus	30.66	36.73
KRH35103	Soybean	nucleus	34.83	35.99
TraesCS5B01G110400.1	Wheat	nucleus	18.3	35.51
KRH01235	Soybean	nucleus, plastid	37.72	34.92
KRH44946	Soybean	nucleus	37.88	34.81
GSMUA_Achr9P08070_001	Banana	nucleus	50.24	33.02
GSMUA_Achr6P17460_001	Banana	cytosol	49.6	32.84
TraesCS5A01G110200.1	Wheat	plastid	0.0	0.0
TraesCS5D01G118400.1	Wheat	plastid	0.0	0.0
TraesCS7A01G319600.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100817858	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EMBL:ACUP02006733	ncoils:Coil
EnsemblPlantsGene:GLYMA_11G015200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	UniProt:K7LMI9
EnsemblPlants:KRH27807	ProteinID:KRH27807	ProteinID:KRH27807.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF213	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294AA95	SEG:seg	:

Description

hypothetical protein

Coordinates

chr11:+:1042337..1047285

Molecular Weight (calculated)

69038.2 Da

IEP (calculated)

9.309

GRAVY (calculated)

-0.593

Length

623 amino acids

Sequence
(BLAST)

001: MGCICSKSSS DDKEKVDEYE KEKEKESSNK SSSVQVVAPA VSTAQLDGST NGSGPRMAKS SSQVIREFVK DNKSNKNHLD AATRSQHQRC NTMSGGVGER
101: KPLMSRILSV QHFAGEQHVD SGWPLWLSSV AAEAIKGWMP RRADSFEKLD QIGQGAYSSV HKARDLETGK IVALKKVRFS STEAESVKFM AREIYILRQL
201: DHPNVIKLEG IVTSRTSTSL YLVFEYMEHD LAGLATIHGF KLTEPQIKCY MQQLLRGLEH CHSRGVLHRD IKGSNLLIDN NGNLKIGDFG LSIVCDPDKK
301: QPLTSRVVTL WYRAPELLLG ATDYGAAIDM WSVGCILAEL LVGKPIMPGR TEVEQMHKIF KLCGSPSEDY WQRTKLPHAT SFKPQHPYNR QVSETFKNFS
401: PTALALVDML LTIEPEDRGS ATSALESQFF TTNPLPCNPS SLPKFSPTKE FDSKRREKEA TRKNAESIKG RGPASVYRGA ADTKVMGSPK YIARGDISMR
501: GKSNTRMSHV KHQSEEDGGS NDNGEATMIS LHNAYTQMQS SMAGPSSLRK NSELPTHHAA AEFSTSSVKK EPGMSVREPG VGYMPKKNRI HCSGPLGGNI
601: DDMLKEHERL MQDVFRSVKK NNP

Best Arabidopsis Sequence Match ( AT4G10010.2 )
(BLAST)

001: MGCICSKGTA EEEVSDQHEK PKENWNKTSS VQLIAPVTSK KDEFSHKSVD GSSGGRKADG LAHKPSARAS GLIVPVDDSD GKTVIVERPT RCHRRWPTAD
101: IGTGGGGFNI FPPSNIPTSV PHSPEAELIA AGWPSWLTSV AGEAIKGWVP RRAESFEKLD KIGQGTYSSV YRARDLETGK MVAMKKVRFV NMDPESVRFM
201: AREINILRKL DHPNVMKLEC LVTSKLSGSL YLVFEYMEHD LSGLALRPGV KFTESQIKCY MKQLLSGLEH CHSRGILHRD IKGPNLLVNN DGVLKIGDFG
301: LANIYHPEQD QPLTSRVVTL WYRAPELLLG ATEYGPGIDL WSVGCILTEL FLGKPIMPGR TEVEQMHKIF KFCGSPSDDY WQKTKLPLAT SFKPQQPYKR
401: VLLETFKNLP PSALALVDKL LSLEPAKRGT ASSTLSSKFF TMEPLPCNVS SLPKYPPSKE LDAKVRDEEA RRKKSETVKG RGPESVRRGS RDFKSTATTP
501: EFVASGQSKD TITTKRFNPQ EDSRTGLRGD RDQKGFSHTN SMIHPSITAT WSKNESCRNN VVELKATRSS NVPMTGRYLS PSHKEDVAVQ TTTTYVRKKN
601: RMHCSGPLMP PGGNIEDILK DHERQIQEAV RKSRLEKSAT RKNNKTCVK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9T0F9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.