Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G118400.1 | Wheat | plastid | 98.4 | 98.4 |
| CDY22631 | Canola | mitochondrion | 3.79 | 3.12 |
| CDY06363 | Canola | mitochondrion | 3.79 | 3.11 |
| Solyc06g064660.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 0.87 | 0.87 |
| TraesCS4A01G227200.2 | Wheat | mitochondrion | 0.15 | 0.15 |
| KRH26282 | Soybean | nucleus | 0.0 | 0.0 |
| Solyc01g103350.2.1 | Tomato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400083223 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400071458 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400064016 | Potato | nucleus | 0.0 | 0.0 |
| KRH77684 | Soybean | nucleus | 0.0 | 0.0 |
| KRH27807 | Soybean | nucleus | 0.0 | 0.0 |
| Solyc11g045610.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| KRH06043 | Soybean | nucleus | 0.0 | 0.0 |
| HORVU5Hr1G035950.2 | Barley | cytosol | 0.0 | 0.0 |
| GSMUA_Achr9P08070_001 | Banana | nucleus | 0.0 | 0.0 |
| GSMUA_Achr6P28920_001 | Banana | plastid | 0.0 | 0.0 |
| GSMUA_Achr6P17460_001 | Banana | cytosol | 0.0 | 0.0 |
| GSMUA_Achr6P07440_001 | Banana | cytosol | 0.0 | 0.0 |
| GSMUA_Achr5P16890_001 | Banana | nucleus | 0.0 | 0.0 |
| GSMUA_Achr2P05620_001 | Banana | cytosol | 0.0 | 0.0 |
| EES15821 | Sorghum | mitochondrion | 0.0 | 0.0 |
| TraesCS5A01G110100.1 | Wheat | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| Zm00001d023945_P003 | Maize | mitochondrion | 0.0 | 0.0 |
| VIT_18s0001g06780.t01 | Wine grape | nucleus | 0.0 | 0.0 |
| VIT_12s0035g01180.t01 | Wine grape | nucleus | 0.0 | 0.0 |
| TraesCS7A01G319600.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7A01G319500.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS6A01G192900.2 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS5D01G118300.1 | Wheat | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| TraesCS5B01G110400.1 | Wheat | nucleus | 0.0 | 0.0 |
| CDY70545 | Canola | nucleus | 0.0 | 0.0 |
| TraesCS5A01G075200.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS4A01G142300.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3A01G498200.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3A01G439200.1 | Wheat | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
| TraesCS3A01G313300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2A01G182800.1 | Wheat | plastid | 0.0 | 0.0 |
| TraesCS2A01G119300.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS1A01G243300.1 | Wheat | nucleus | 0.0 | 0.0 |
| Bra020008.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| CDX86879 | Canola | nucleus | 0.0 | 0.0 |
| CDX72813 | Canola | plastid | 0.0 | 0.0 |
| CDX68307 | Canola | plastid | 0.0 | 0.0 |
| Bra037899.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| Bra035472.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| Bra031674.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| Bra030788.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| Bra028011.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| Bra027895.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| CDX93496 | Canola | nucleus | 0.0 | 0.0 |
| Bra016132.1-P | Field mustard | plastid | 0.0 | 0.0 |
| Bra010213.1-P | Field mustard | nucleus | 0.0 | 0.0 |
| Bra007973.1-P | Field mustard | nucleus, plastid | 0.0 | 0.0 |
| Bra003921.1-P | Field mustard | plastid | 0.0 | 0.0 |
| AT4G10010.2 | Thale cress | nucleus | 0.0 | 0.0 |
| AT1G71530.1 | Thale cress | plastid | 0.0 | 0.0 |
| AT1G57700.1 | Thale cress | nucleus | 0.0 | 0.0 |
| AT1G33770.1 | Thale cress | nucleus | 0.0 | 0.0 |
| CDY31076 | Canola | nucleus | 0.0 | 0.0 |
| AT1G09600.1 | Thale cress | nucleus | 0.0 | 0.0 |
| CDY67268 | Canola | nucleus, plastid | 0.0 | 0.0 |
| CDY58380 | Canola | nucleus | 0.0 | 0.0 |
| CDY53144 | Canola | nucleus | 0.0 | 0.0 |
| CDY50891 | Canola | nucleus, plastid | 0.0 | 0.0 |
| CDY48795 | Canola | nucleus | 0.0 | 0.0 |
| CDY39924 | Canola | nucleus | 0.0 | 0.0 |
| CDY36688 | Canola | plastid | 0.0 | 0.0 |
| CDY31800 | Canola | nucleus | 0.0 | 0.0 |
| CDY70577 | Canola | nucleus | 0.0 | 0.0 |
| CDY29169 | Canola | nucleus | 0.0 | 0.0 |
| CDY20686 | Canola | nucleus | 0.0 | 0.0 |
| CDY15287 | Canola | nucleus | 0.0 | 0.0 |
| CDY03697 | Canola | nucleus, plastid | 0.0 | 0.0 |
| CDX99520 | Canola | nucleus | 0.0 | 0.0 |
| CDX96330 | Canola | plastid | 0.0 | 0.0 |
| CDX94278 | Canola | cytosol, mitochondrion, nucleus, plasma membrane | 0.0 | 0.0 |
| CDX93753 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G110200.1 | EnsemblPlantsGene:TraesCS5A01G110200 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR002885 | InterPro:IPR011990 | InterPro:Pentatricopeptide_repeat | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF755 |
| PFAM:PF01535 | PFAM:PF13041 | PFscan:PS51375 | SEG:seg | TIGRFAMs:TIGR00756 | MapMan:35.1 |
Description
No Description!
Coordinates
chr5A:-:207660086..207662146
Molecular Weight (calculated)
75117.5 Da
IEP (calculated)
9.667
GRAVY (calculated)
0.049
Length
686 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIAMASTSS PVAALKHPHF LDSKALKSLK RARTRSCALA DADAAAAAPR TFQAELRPDS KNAPALSAEI RRLVRAGRLR SALCLLDHLS HRGVPASPSA
101: FTALLSACRS LAHARQIHAH LRVHGLDSNE FLLARLVEVY LAVGAAEEAR QVLGGLPRAS AFSWNALLHG HVRRGRREAG DAVAGGFVEM RAAGANANEY
201: TYGCVLKSIS GSARPSMVMA TATHAMLVKN AFAGAPGMLM TGLMDVYFRC GKVKLAMMVF EEMPERDVVA WGAVISGFAH KGLKREALEH FRWMVENGVK
301: VNSVVLTSIV PVIGDIRARN LGREIHGLVL KKFPDRKDVA KVHAGLVDMY CKCGDMVSGR RVFYSTKKRN AVSWTALMSG YASNGRPDQA LRCIVWMQQE
401: GIRPDLVAVG TVLPVCTKLR ALSEGKEIHA YALRRWFLPN VSLCTSLITL YGTCCHLEYS RRVFHAMDKK TVRAWTALVD AYLKNRDSST AIEVFRSMLL
501: SNRRPDAVAI TRILSACSDI GALQLGKEVH GQVLKLRMEP LPLVAAELVN MYGRCGDLKA AQRVFNRTDS KGSLTCTAII EAYAINQRHK EALDLFSWML
601: SNNFAPTIVT FNVVLRICDA AGLHDEALEI FDSMVQGYNL EASEENYDCI ISLLTSAGRT AEAQRFADLK AALFSSPAPF LDFEQQ
101: FTALLSACRS LAHARQIHAH LRVHGLDSNE FLLARLVEVY LAVGAAEEAR QVLGGLPRAS AFSWNALLHG HVRRGRREAG DAVAGGFVEM RAAGANANEY
201: TYGCVLKSIS GSARPSMVMA TATHAMLVKN AFAGAPGMLM TGLMDVYFRC GKVKLAMMVF EEMPERDVVA WGAVISGFAH KGLKREALEH FRWMVENGVK
301: VNSVVLTSIV PVIGDIRARN LGREIHGLVL KKFPDRKDVA KVHAGLVDMY CKCGDMVSGR RVFYSTKKRN AVSWTALMSG YASNGRPDQA LRCIVWMQQE
401: GIRPDLVAVG TVLPVCTKLR ALSEGKEIHA YALRRWFLPN VSLCTSLITL YGTCCHLEYS RRVFHAMDKK TVRAWTALVD AYLKNRDSST AIEVFRSMLL
501: SNRRPDAVAI TRILSACSDI GALQLGKEVH GQVLKLRMEP LPLVAAELVN MYGRCGDLKA AQRVFNRTDS KGSLTCTAII EAYAINQRHK EALDLFSWML
601: SNNFAPTIVT FNVVLRICDA AGLHDEALEI FDSMVQGYNL EASEENYDCI ISLLTSAGRT AEAQRFADLK AALFSSPAPF LDFEQQ
001: MEVVSSLGIR DLPASLSVTT SLNHRPHRSD KDGAPAKSPI RPSRTRRPST SPAKKPKPFR ERDAFPSSLP LHSKNPYIIH RDIQIFARQN NLEVALTILD
101: YLEQRGIPVN ATTFSALLEA CVRRKSLLHG KQVHVHIRIN GLESNEFLRT KLVHMYTACG SVKDAQKVFD ESTSSNVYSW NALLRGTVIS GKKRYQDVLS
201: TFTEMRELGV DLNVYSLSNV FKSFAGASAL RQGLKTHALA IKNGLFNSVF LKTSLVDMYF KCGKVGLARR VFDEIVERDI VVWGAMIAGL AHNKRQWEAL
301: GLFRTMISEE KIYPNSVILT TILPVLGDVK ALKLGKEVHA HVLKSKNYVE QPFVHSGLID LYCKCGDMAS GRRVFYGSKQ RNAISWTALM SGYAANGRFD
401: QALRSIVWMQ QEGFRPDVVT IATVLPVCAE LRAIKQGKEI HCYALKNLFL PNVSLVTSLM VMYSKCGVPE YPIRLFDRLE QRNVKAWTAM IDCYVENCDL
501: RAGIEVFRLM LLSKHRPDSV TMGRVLTVCS DLKALKLGKE LHGHILKKEF ESIPFVSARI IKMYGKCGDL RSANFSFDAV AVKGSLTWTA IIEAYGCNEL
601: FRDAINCFEQ MVSRGFTPNT FTFTAVLSIC SQAGFVDEAY RFFNLMLRMY NLQPSEEHYS LVIELLNRCG RVEEAQRLAV MSSSSSLQT
101: YLEQRGIPVN ATTFSALLEA CVRRKSLLHG KQVHVHIRIN GLESNEFLRT KLVHMYTACG SVKDAQKVFD ESTSSNVYSW NALLRGTVIS GKKRYQDVLS
201: TFTEMRELGV DLNVYSLSNV FKSFAGASAL RQGLKTHALA IKNGLFNSVF LKTSLVDMYF KCGKVGLARR VFDEIVERDI VVWGAMIAGL AHNKRQWEAL
301: GLFRTMISEE KIYPNSVILT TILPVLGDVK ALKLGKEVHA HVLKSKNYVE QPFVHSGLID LYCKCGDMAS GRRVFYGSKQ RNAISWTALM SGYAANGRFD
401: QALRSIVWMQ QEGFRPDVVT IATVLPVCAE LRAIKQGKEI HCYALKNLFL PNVSLVTSLM VMYSKCGVPE YPIRLFDRLE QRNVKAWTAM IDCYVENCDL
501: RAGIEVFRLM LLSKHRPDSV TMGRVLTVCS DLKALKLGKE LHGHILKKEF ESIPFVSARI IKMYGKCGDL RSANFSFDAV AVKGSLTWTA IIEAYGCNEL
601: FRDAINCFEQ MVSRGFTPNT FTFTAVLSIC SQAGFVDEAY RFFNLMLRMY NLQPSEEHYS LVIELLNRCG RVEEAQRLAV MSSSSSLQT
Arabidopsis Description
PCMP-A3Pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C9I3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.