Factsheet for TraesCS1A01G243300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G243300.1	Wheat	nucleus	99.61	99.8
TraesCS1B01G254800.1	Wheat	nucleus	99.42	99.8
HORVU1Hr1G056380.1	Barley	nucleus	98.64	98.83
HORVU1Hr1G056390.2	Barley	plastid	87.72	88.06
TraesCS3A01G498200.1	Wheat	nucleus	85.38	86.39
Os05t0389700-01	Rice	nucleus	86.16	85.16
GSMUA_Achr5P05370_001	Banana	nucleus	82.46	81.98
EES18167	Sorghum	nucleus	82.26	81.78
PGSC0003DMT400015241	Potato	nucleus	75.05	76.09
KRH73489	Soybean	nucleus	76.22	75.78
KRH14656	Soybean	nucleus	76.02	75.58
Solyc06g073630.2.1	Tomato	nucleus	74.27	75.3
KRG89779	Soybean	nucleus	76.22	75.19
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	53.61	59.14
TraesCS4A01G142300.1	Wheat	nucleus	37.04	34.3
TraesCS2A01G119300.1	Wheat	nucleus	37.62	34.1
TraesCS3A01G439200.1	Wheat	cytosol, plasma membrane, plastid	34.89	32.19
TraesCS3A01G313300.1	Wheat	cytosol	39.57	29.55
TraesCS5A01G110100.1	Wheat	endoplasmic reticulum, plasma membrane	37.43	29.49
TraesCS6A01G192900.2	Wheat	nucleus	39.57	28.19
TraesCS4A01G227200.2	Wheat	mitochondrion	34.31	27.24
TraesCS7A01G319500.1	Wheat	nucleus	38.4	26.51
TraesCS2A01G182800.1	Wheat	plastid	35.09	26.01
TraesCS5A01G075200.1	Wheat	nucleus	34.11	25.89
TraesCS5A01G110200.1	Wheat	plastid	0.0	0.0
TraesCS7A01G319600.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1A01G243300	EnsemblPlants:TraesCS1A01G243300.1	TIGR:cd07840	SEG:seg

Description

No Description!

Coordinates

chr1A:+:431776563..431780503

Molecular Weight (calculated)

56810.4 Da

IEP (calculated)

9.455

GRAVY (calculated)

-0.859

Length

513 amino acids

Sequence
(BLAST)

001: MATAAPGQLN LDDYPSWGSR GVDCFEKLEQ IGEGTYGQVF MAKETETKEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIQLKEI VTSPGPDRDE
101: QGKQIDGNKY KGSIYMVFEY MDHDLTGLAD KPGMRFTIPQ IKCYMKQLLT GLHYCHINQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNANLTNR
201: VITLWYRPPE LLLGSTKYGP AVDMWSVGCI FAELLNGKPI LPGKNEPDQL TKIFELCGTP DELIWPGVTK MPWYNNLKPP RQLKRHVKDA FKHFDFHALD
301: LLERMLTLDP SKRISANEAL DSEYFWTDPL PCDPKSLPKY EASHEYQTKK RRQQQRQADD AAAKRQKTHH PQPPHARLPP IQQSGHQIRP AQPTNNPHPP
401: MASGSNHHYG KPRGPGGPNR YPPGGNQGGG GYPNRGGQGG GYGSGPYPPQ QGRGPPPYPG GGPRGGGSSG GYGGAPNFPQ AGPYGPGGGP GRGPNYPPQA
501: GSRNQQQQYG NWQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.