Factsheet for HORVU1Hr1G056390.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G056380.1	Barley	nucleus	89.04	88.87
TraesCS1D01G243300.1	Wheat	nucleus	88.26	88.09
TraesCS1B01G254800.1	Wheat	nucleus	88.06	88.06
TraesCS1A01G243300.1	Wheat	nucleus	88.06	87.72
Os05t0389700-01	Rice	nucleus	77.1	75.92
GSMUA_Achr5P05370_001	Banana	nucleus	72.8	72.09
EES18167	Sorghum	nucleus	72.8	72.09
HORVU3Hr1G110150.3	Barley	plastid	76.13	70.09
PGSC0003DMT400015241	Potato	nucleus	66.73	67.39
KRH73489	Soybean	nucleus	67.71	67.05
KRH14656	Soybean	nucleus	67.71	67.05
KRG89779	Soybean	nucleus	68.1	66.92
Solyc06g073630.2.1	Tomato	nucleus	65.95	66.6
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	53.82	59.14
HORVU5Hr1G035950.2	Barley	cytosol	28.57	53.48
HORVU2Hr1G020680.2	Barley	cytosol	31.7	32.99
HORVU4Hr1G048510.1	Barley	cytosol	33.46	30.87
HORVU3Hr1G095820.3	Barley	cytosol, peroxisome, plasma membrane	31.31	28.83
HORVU6Hr1G046160.12	Barley	nucleus	37.57	27.43
HORVU3Hr1G026900.7	Barley	cytosol	36.2	27.05
HORVU4Hr1G015320.4	Barley	mitochondrion	31.31	24.77
HORVU7Hr1G076360.30	Barley	nucleus	34.83	23.96
HORVU2Hr1G034440.3	Barley	plastid	32.09	23.6
HORVU5Hr1G020060.7	Barley	nucleus	31.31	23.49

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	UniProt:A0A287FQM9
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G056390	EnsemblPlants:HORVU1Hr1G056390.2	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B4697DD	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:+:413852097..413856629

Molecular Weight (calculated)

56795.2 Da

IEP (calculated)

10.695

GRAVY (calculated)

-0.983

Length

511 amino acids

Sequence
(BLAST)

001: WRRRRRGSST STSTRRGAPA ASTASRSSSR SARAHTGKCS WPRRRRRRRS SRSRRSAWTT SARFPITAIR EIKILKKLHH QNVIQLKEIV TSPGPDRDEQ
101: GKQIDGNKYK GSIYMVFEYM DHDLTGLADK PGMRFTIPQI KCYMKQLLTG LHYCHINQVL HRDIKGSNLL IDNEGNLKLA DFGLARSFSN DHNANLTNRV
201: ITLWYRPPEL LLGSTKYGPA VDMWSVGCIF AELLNGKPIL PGKNEPDQLT KIFELCGTPD ELIWPGVTKM PWYNNLKPPR QLKRHVKDAF KHFDFHALDL
301: LEKMLTLDPS KRISANEALD SEYFWTDPLP CDPKSLPKYE ASHEYQTKKR RQQQRQADDA AAKRQKTHHS QPPHARLPPI QQSGHQIRPA QPTNNPHPPM
401: ASGSSHHYGK PRGPGGPNRY PPGGNQGGGG YPNRGGQGGG YGSGPYPQQG RGPPPYPGGG PRGGGSSGGY GAGAPNFPQA GPYGPGGPGR GPNYPPQAGS
501: RNQQQQYGNW Q

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.