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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
iPSORT:secretory
MultiLoc:cytosol
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0668000-00 Rice cytosol, plasma membrane 6.11 96.77
TraesCS2D01G120200.1 Wheat nucleus 80.24 82.77
TraesCS2A01G119300.1 Wheat nucleus 80.04 69.43
TraesCS2B01G139000.1 Wheat nucleus 80.24 69.0
HORVU5Hr1G035950.2 Barley cytosol 37.07 66.67
Zm00001d022499_P001 Maize plastid 74.95 64.45
KXG36890 Sorghum plastid 74.75 64.16
Zm00001d007111_P001 Maize plastid 74.75 64.05
HORVU4Hr1G048510.1 Barley cytosol 68.43 60.65
Solyc01g098160.2.1 Tomato nucleus 60.69 51.83
PGSC0003DMT400057839 Potato cytosol 60.69 51.74
KRG96918 Soybean cytosol 59.06 50.7
Bra027966.1-P Field mustard nucleus 57.64 50.27
CDY67158 Canola plastid 57.84 50.18
VIT_14s0030g01260.t01 Wine grape cytosol, nucleus, plastid 59.06 49.83
CDX95237 Canola nucleus 57.84 49.74
AT1G54610.1 Thale cress nucleus 57.64 49.48
KRH34013 Soybean nucleus 57.84 48.97
KRH68662 Soybean nucleus 58.86 48.82
KRG92786 Soybean nucleus 57.03 48.28
Bra009977.1-P Field mustard cytosol, nucleus, plastid 49.08 42.65
CDX86178 Canola cytosol, nucleus, plastid 49.08 42.65
CDX80672 Canola cytosol, plastid 48.88 41.96
AT3G05050.1 Thale cress nucleus, plastid 50.51 41.82
CDY18783 Canola plastid 48.68 41.35
Bra040637.1-P Field mustard plastid 48.68 41.35
CDY27801 Canola cytosol 48.68 40.99
Bra039466.1-P Field mustard plastid 48.68 40.99
CDY41930 Canola cytosol 48.88 40.89
CDY53230 Canola nucleus, plastid 48.47 40.75
HORVU3Hr1G095820.3 Barley cytosol, peroxisome, plasma membrane 41.34 36.58
HORVU3Hr1G026900.7 Barley cytosol 49.69 35.67
HORVU1Hr1G056390.2 Barley plastid 32.99 31.7
HORVU1Hr1G056380.1 Barley nucleus 32.99 31.64
HORVU6Hr1G046160.12 Barley nucleus 43.79 30.71
HORVU7Hr1G076360.30 Barley nucleus 45.62 30.15
HORVU4Hr1G015320.4 Barley mitochondrion 39.31 29.88
HORVU2Hr1G034440.3 Barley plastid 40.94 28.92
HORVU3Hr1G110150.3 Barley plastid 31.98 28.29
HORVU5Hr1G020060.7 Barley nucleus 39.1 28.19
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.1.8Gene3D:3.30.200.20UniProt:A0A287HAR9GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:HORVU2Hr1G020680EnsemblPlants:HORVU2Hr1G020680.2InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF219InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI000B47FCB7SEG:seg:::
Description
No Description!
Coordinates
chrchr2H:-:57274119..57278650
Molecular Weight (calculated)
44654.4 Da
IEP (calculated)
9.717
GRAVY (calculated)
-0.467
Length
491 amino acids
Sequence
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX LDHPNVMKLY
101: GLVTSRMSCS LYLVFDYMVH DLAGLAASPD IKFTLPQVKC YVHQLLSGLE HCHNQGVLHR DIKGSNLLLD DDGVLKIGDF GLASFFDPNH KQPMTSRVVT
201: LWYRPPELLL GATDYGVGVD LWSAGCILAE LLAGKPIMPG RTEVEQLHKI FKLCGSPAEE YWKKSKLPHA TIFKPQQPYK RRIAETFKDF PQSALRLIET
301: LLSIDPADRL TATAALNSDF FKTEPRACDP SSLPQYPPSK EMDAKRRDEE ARRLRAAGSR PNGDGARKTR TRDRPRAVPA PEANAELQAN IDKRRLITHA
401: NAKSKSEKFP PPHQDGALGY PLGCSNHMEP TFEPPDPSSF STVFPYDKTA VPTWSGPLVD PPGGNQKRKH KSGRSSKQPS TARARSWKLG R
Best Arabidopsis Sequence Match ( AT3G05050.1 )
(BLAST)
001: MGCVLGRPGS SGSVSGSRDE VSTRIESNRH QVNNVSVTKT ETTESTSAVV VASASNGEEV RNHEDVVDQK KENGFVVTEA KERKSKGERK RSKPPDPRRS
101: NPPKNLLGEQ VAAGWPSWLS EVCGEALSGW LPRKADSFEK IDKIGSGTYS NVYKAKDSLT GNIVALKKVR CDVNERESLK FMAREILILR RLDHPNVIKL
201: EGLVTSRMSS SLYLVFRYMD HDLAGLAASP EIKFTEQQVK CYMKQLLSGL EHCHNRGVLH RDIKGSNLLI DDGGVLRIGD FGLATFFDAS KRQEMTNRVV
301: TLWYRSPELL HGVVEYSVGV DLWSAGCILA ELLAGRAIMP GRNEVEQLHR IYKLCGSPSE EYWKKIRLPS THKHAHHKPL PQYKRRIREV YKDFSPEALS
401: LLDTLLALDP AERQTATDVL MSDFFTTEPL ACQPSDLPKY PPSKEIDAKR RDEEYRRQRE ARKAQGESGR RMRPRERAPR AMPAPEANAE NQSNIDRMRM
501: ITHANAKSKS EKFPPPHQDG SLGFQVGSSR RLDPSEIPYS TNSFTSSYSK EPFQTWSGPL APIGAPDSTT RRRNDINKER RMASKVKGKR IVV
Arabidopsis Description
At3g05050/T12H1_1 [Source:UniProtKB/TrEMBL;Acc:Q9MAB4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.