Factsheet for Bra039466.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018296.1-P
Bra033467.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05050.1	Bra018296.1-P	AT3G51920.1	17360592
AT3G05050.1	Bra033467.1-P	AT3G51920.1	17360592
AT3G05050.1	Bra039723.1-P	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27801	Canola	cytosol	99.14	99.14
Bra040637.1-P	Field mustard	plastid	82.33	83.05
AT3G05050.1	Thale cress	nucleus, plastid	82.5	81.11
Os07t0668000-00	Rice	cytosol, plasma membrane	3.95	74.19
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	70.15	72.39
TraesCS2D01G120200.1	Wheat	nucleus	47.86	58.61
KRH34013	Soybean	nucleus	57.29	57.59
KRG96918	Soybean	cytosol	56.43	57.52
Solyc01g098160.2.1	Tomato	nucleus	56.6	57.39
PGSC0003DMT400057839	Potato	cytosol	56.6	57.29
Bra027966.1-P	Field mustard	nucleus	55.06	57.02
Zm00001d047482_P001	Maize	nucleus	53.52	56.93
KRG92786	Soybean	nucleus	56.6	56.9
Zm00001d029143_P003	Maize	nucleus	52.83	56.31
TraesCS2A01G119300.1	Wheat	nucleus	54.55	56.18
OQU92600	Sorghum	nucleus	54.03	55.85
TraesCS4B01G151800.1	Wheat	nucleus	52.32	55.66
KRH68662	Soybean	nucleus	56.43	55.57
TraesCS2B01G139000.1	Wheat	nucleus	54.37	55.52
TraesCS4D01G151100.1	Wheat	nucleus	52.14	54.87
Zm00001d007111_P001	Maize	plastid	53.86	54.8
TraesCS4A01G142300.1	Wheat	nucleus	51.97	54.69
KXG36890	Sorghum	plastid	53.52	54.55
Zm00001d022499_P001	Maize	plastid	53.34	54.47
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	54.03	54.12
HORVU4Hr1G048510.1	Barley	cytosol	46.48	48.92
HORVU2Hr1G020680.2	Barley	cytosol	40.99	48.68
Bra035716.1-P	Field mustard	cytosol	47.86	48.1
Bra022756.1-P	Field mustard	cytosol	47.17	48.08
Bra030962.1-P	Field mustard	plastid	47.0	41.58
Bra037899.1-P	Field mustard	nucleus	43.74	41.33
Bra024341.1-P	Field mustard	cytosol	27.27	39.95
Bra028011.1-P	Field mustard	nucleus	42.71	39.84
Bra010213.1-P	Field mustard	nucleus	42.71	39.78
Bra038097.1-P	Field mustard	plastid	46.48	39.74
Bra003921.1-P	Field mustard	plastid	42.37	39.71
Bra016132.1-P	Field mustard	plastid	43.05	39.47
Bra036018.1-P	Field mustard	nucleus	42.02	39.45
Bra027895.1-P	Field mustard	nucleus	44.77	39.31
Bra027540.1-P	Field mustard	nucleus	42.71	38.97
Bra007973.1-P	Field mustard	nucleus, plastid	43.05	38.85
Bra030788.1-P	Field mustard	nucleus	42.37	38.24
Bra035472.1-P	Field mustard	nucleus	45.11	37.46
Bra015920.1-P	Field mustard	cytosol	40.31	36.78
Bra031674.1-P	Field mustard	nucleus	43.57	36.6
Bra009045.1-P	Field mustard	nucleus	30.87	35.36
Bra028333.1-P	Field mustard	nucleus	30.7	35.24
Bra028432.1-P	Field mustard	nucleus, plastid	38.59	34.56
Bra020008.1-P	Field mustard	nucleus	44.6	34.48
Bra031892.1-P	Field mustard	nucleus	30.53	34.36
Bra015260.1-P	Field mustard	mitochondrion, nucleus	42.2	34.02
Bra016547.1-P	Field mustard	nucleus	41.51	32.61
Bra041128.1-P	Field mustard	plastid	27.27	29.78
Bra013662.1-P	Field mustard	nucleus	35.16	28.55
Bra001023.1-P	Field mustard	nucleus	38.42	21.05
Bra039147.1-P	Field mustard	nucleus	38.59	20.79

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra039466	EnsemblPlants:Bra039466.1	EnsemblPlants:Bra039466.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4FEE5	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF319	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254749B	SEG:seg

Description

AT3G05050 (E=7e-248) | protein kinase family protein

Coordinates

chrA05:+:23467109..23469734

Molecular Weight (calculated)

65497.3 Da

IEP (calculated)

9.682

GRAVY (calculated)

-0.599

Length

583 amino acids

Sequence
(BLAST)

001: MGCVLSRPGS SGLVSESREE ASTRIESNRK EVNNVSVTTT ESTSVVAVVA SAGEEVRNGE AIVKDHKEVN GDTKERKPKR STTKPDPRLS NPPKNLLGEQ
101: VAAGWPPWLT EVCGEALNGW LPRKADSFEK IEKIGSGTYS NVYKARDSLT GAIVALKKVR CDSMEQENLK FMAREILILR RLNHPNVIKL EGLVTSRMSN
201: SLYLVFRYMH HDLAGLAASP VITFTEQQVK CYMKQILSGL EHCHSQGVLH RDIKGSNLLI DDDGVLRIGD FGLATFFDAS VRQKLTTRVV TLWYRAPELL
301: HGAVEYGVGI DLWSAGCILA ELLSGRPIMP GRNEVDQIHR IYKLCGSPSE EYWRKIRLPS HVKHANHMAK PQHERKVREE FKNFSPEALS LVDRLLALDP
401: LERLTATDAL TSDFFTTEPF ACEPSELPKY PPTKEIDAKK RDEEYRRQRE VRKVQGESGR RIRPRDRAPR AMPAPEANAE NQSNIDRMRL ITHANAKSKS
501: EKFPPPHQDG SLGYQVGCSR RLDPSEIPFS SNSFTATYSK EPFQTWSGPL APTEAHDSTA KRMKDINKER RKAAKLKGKR IVV

Best Arabidopsis Sequence Match ( AT3G05050.1 )
(BLAST)

001: MGCVLGRPGS SGSVSGSRDE VSTRIESNRH QVNNVSVTKT ETTESTSAVV VASASNGEEV RNHEDVVDQK KENGFVVTEA KERKSKGERK RSKPPDPRRS
101: NPPKNLLGEQ VAAGWPSWLS EVCGEALSGW LPRKADSFEK IDKIGSGTYS NVYKAKDSLT GNIVALKKVR CDVNERESLK FMAREILILR RLDHPNVIKL
201: EGLVTSRMSS SLYLVFRYMD HDLAGLAASP EIKFTEQQVK CYMKQLLSGL EHCHNRGVLH RDIKGSNLLI DDGGVLRIGD FGLATFFDAS KRQEMTNRVV
301: TLWYRSPELL HGVVEYSVGV DLWSAGCILA ELLAGRAIMP GRNEVEQLHR IYKLCGSPSE EYWKKIRLPS THKHAHHKPL PQYKRRIREV YKDFSPEALS
401: LLDTLLALDP AERQTATDVL MSDFFTTEPL ACQPSDLPKY PPSKEIDAKR RDEEYRRQRE ARKAQGESGR RMRPRERAPR AMPAPEANAE NQSNIDRMRM
501: ITHANAKSKS EKFPPPHQDG SLGFQVGSSR RLDPSEIPYS TNSFTSSYSK EPFQTWSGPL APIGAPDSTT RRRNDINKER RMASKVKGKR IVV

Arabidopsis Description

At3g05050/T12H1_1 [Source:UniProtKB/TrEMBL;Acc:Q9MAB4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.