Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047482_P001 | Maize | nucleus | 94.33 | 94.16 |
| OQU92600 | Sorghum | nucleus | 94.88 | 92.02 |
| TraesCS4B01G151800.1 | Wheat | nucleus | 86.65 | 86.5 |
| TraesCS4D01G151100.1 | Wheat | nucleus | 86.84 | 85.74 |
| TraesCS4A01G142300.1 | Wheat | nucleus | 85.74 | 84.66 |
| Zm00001d022499_P001 | Maize | plastid | 83.55 | 80.03 |
| Zm00001d007111_P001 | Maize | plastid | 83.36 | 79.58 |
| Zm00001d002645_P001 | Maize | cytosol | 33.09 | 76.05 |
| HORVU4Hr1G048510.1 | Barley | cytosol | 73.49 | 72.56 |
| Zm00001d040829_P003 | Maize | plastid | 68.92 | 67.68 |
| Solyc01g098160.2.1 | Tomato | nucleus | 69.29 | 65.91 |
| PGSC0003DMT400057839 | Potato | cytosol | 69.1 | 65.62 |
| KRG96918 | Soybean | cytosol | 67.46 | 64.51 |
| Bra027966.1-P | Field mustard | nucleus | 65.27 | 63.41 |
| CDY67158 | Canola | plastid | 65.45 | 63.25 |
| VIT_14s0030g01260.t01 | Wine grape | cytosol, nucleus, plastid | 67.28 | 63.23 |
| AT1G54610.1 | Thale cress | nucleus | 65.45 | 62.59 |
| CDX95237 | Canola | nucleus | 65.27 | 62.52 |
| KRH68662 | Soybean | nucleus | 67.64 | 62.5 |
| KRH34013 | Soybean | nucleus | 66.18 | 62.41 |
| KRG92786 | Soybean | nucleus | 65.08 | 61.38 |
| CDX86178 | Canola | cytosol, nucleus, plastid | 55.76 | 53.98 |
| Bra009977.1-P | Field mustard | cytosol, nucleus, plastid | 55.76 | 53.98 |
| AT3G05050.1 | Thale cress | nucleus, plastid | 58.5 | 53.96 |
| Bra040637.1-P | Field mustard | plastid | 56.86 | 53.81 |
| CDY18783 | Canola | plastid | 56.86 | 53.81 |
| CDX80672 | Canola | cytosol, plastid | 55.94 | 53.5 |
| Zm00001d012392_P001 | Maize | cytosol | 19.93 | 53.43 |
| CDY53230 | Canola | nucleus, plastid | 56.49 | 52.91 |
| Bra039466.1-P | Field mustard | plastid | 56.31 | 52.83 |
| CDY27801 | Canola | cytosol | 56.31 | 52.83 |
| CDY41930 | Canola | cytosol | 56.49 | 52.64 |
| Zm00001d042285_P001 | Maize | endoplasmic reticulum | 47.53 | 47.02 |
| Zm00001d011967_P001 | Maize | plastid | 47.35 | 46.33 |
| Zm00001d008874_P002 | Maize | nucleus | 58.5 | 45.91 |
| Zm00001d039425_P003 | Maize | nucleus | 57.95 | 44.77 |
| Zm00001d032078_P002 | Maize | cytosol | 26.33 | 44.58 |
| Zm00001d016846_P002 | Maize | cytosol | 52.47 | 40.71 |
| Zm00001d035050_P002 | Maize | nucleus | 55.76 | 40.5 |
| Zm00001d049698_P003 | Maize | nucleus | 56.67 | 40.31 |
| Zm00001d023945_P003 | Maize | mitochondrion | 49.73 | 40.0 |
| Zm00001d048994_P003 | Maize | vacuole | 46.44 | 38.37 |
| Zm00001d033847_P003 | Maize | nucleus | 35.65 | 38.24 |
| Zm00001d006759_P012 | Maize | plastid | 49.36 | 37.45 |
| Zm00001d022041_P001 | Maize | plastid | 50.46 | 36.85 |
| Zm00001d013371_P001 | Maize | nucleus | 34.92 | 36.17 |
| Zm00001d000147_P006 | Maize | nucleus, plastid | 47.71 | 35.41 |
| Zm00001d041514_P002 | Maize | plastid | 47.17 | 35.29 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100281653 | MapMan:18.4.3.1.8 | Gene3D:3.30.200.20 | UniProt:B6SXI8 | EMBL:EU957453 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | ProteinID:ONL98054.1 | PFAM:PF00069 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF176 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000182C6AA | EnsemblPlantsGene:Zm00001d029143 |
| EnsemblPlants:Zm00001d029143_P003 | EnsemblPlants:Zm00001d029143_T003 | SEG:seg | : | : | : |
Description
Transposon protein
Coordinates
chr1:-:60338845..60344732
Molecular Weight (calculated)
60395.1 Da
IEP (calculated)
9.670
GRAVY (calculated)
-0.545
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCVHGRPST PSPDHPPQPP EPPAPAAAQE ATGKAEQPAA PAEKPAPRER RSLSPRSGPG PSFANRARGE QVAAGWPAWL SAVAGEAIDG WTPRRADSFE
101: KIDKIGQGTY SNVYKARDTV SGKIVALKKV RFDNLEPESV RFMAREILIL RRLDHPNVVK LDGLVTSRMS CSLYLVFEYM EHDLAGLAAS PEIKFTEPQV
201: KCYMNQLLSG LEHCHDRGVL HRDIKGSNLL LDNNGMLKIA DFGLASFFDP DRKQPMTSRV VTLWYRPPEL LLGATDYGVG VDLWSAGCIL AELLAGRPIM
301: PGQTEVEQMH KIFKLCGSPT EEYWKKSKLP GATIFKTQLP YKRRIRETFE DFPQSALQLI EILLAINPAD RLTATSALRS DFFTTEPFAC EPSSLPKYPP
401: SKEIDVKRRD EEARRLRATG GRANGDGAKK TRARDRPKAV PAPEANAELQ VNIDKRRFVT HAAKSKSEKF PPPHQDGAVG VPLDTSNHMD PLYEPPDPSS
501: FSTVFTHEKG AVPTWSGPLV DPAAVVNQKR KHKFGRSSKQ PATARAR
101: KIDKIGQGTY SNVYKARDTV SGKIVALKKV RFDNLEPESV RFMAREILIL RRLDHPNVVK LDGLVTSRMS CSLYLVFEYM EHDLAGLAAS PEIKFTEPQV
201: KCYMNQLLSG LEHCHDRGVL HRDIKGSNLL LDNNGMLKIA DFGLASFFDP DRKQPMTSRV VTLWYRPPEL LLGATDYGVG VDLWSAGCIL AELLAGRPIM
301: PGQTEVEQMH KIFKLCGSPT EEYWKKSKLP GATIFKTQLP YKRRIRETFE DFPQSALQLI EILLAINPAD RLTATSALRS DFFTTEPFAC EPSSLPKYPP
401: SKEIDVKRRD EEARRLRATG GRANGDGAKK TRARDRPKAV PAPEANAELQ VNIDKRRFVT HAAKSKSEKF PPPHQDGAVG VPLDTSNHMD PLYEPPDPSS
501: FSTVFTHEKG AVPTWSGPLV DPAAVVNQKR KHKFGRSSKQ PATARAR
001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA
Arabidopsis Description
Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.