Factsheet for Bra027966.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54610.1	Bra000214.1-P	AT2G41090.1	17360592
AT1G54610.1	Bra000214.1-P	AT2G41100.1	17360592
AT1G54610.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G54610.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G54610.1	Bra039723.1-P	AT4G14640.1	17360592
AT1G54610.1	Bra002368.1-P	AT5G21274.1	17360592
AT1G54610.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67158	Canola	plastid	99.47	98.94
AT1G54610.1	Thale cress	nucleus	90.94	89.51
Os07t0668000-00	Rice	cytosol, plasma membrane	4.09	74.19
TraesCS2D01G120200.1	Wheat	nucleus	58.79	69.54
PGSC0003DMT400057839	Potato	cytosol	69.8	68.23
Solyc01g098160.2.1	Tomato	nucleus	69.63	68.17
VIT_14s0030g01260.t01	Wine grape	cytosol, nucleus, plastid	70.34	68.04
KRG96918	Soybean	cytosol	68.74	67.66
KRH68662	Soybean	nucleus	69.98	66.55
KRH34013	Soybean	nucleus	68.56	66.55
Zm00001d047482_P001	Maize	nucleus	64.48	66.24
KRG92786	Soybean	nucleus	67.32	65.34
Zm00001d029143_P003	Maize	nucleus	63.41	65.27
TraesCS2A01G119300.1	Wheat	nucleus	65.01	64.66
Zm00001d022499_P001	Maize	plastid	65.54	64.62
OQU92600	Sorghum	nucleus	64.65	64.54
TraesCS4B01G151800.1	Wheat	nucleus	62.52	64.23
TraesCS2B01G139000.1	Wheat	nucleus	64.83	63.92
Zm00001d007111_P001	Maize	plastid	65.01	63.87
KXG36890	Sorghum	plastid	64.65	63.64
TraesCS4D01G151100.1	Wheat	nucleus	62.34	63.36
TraesCS4A01G142300.1	Wheat	nucleus	61.99	63.0
HORVU2Hr1G020680.2	Barley	cytosol	50.27	57.64
Bra040637.1-P	Field mustard	plastid	58.97	57.44
HORVU4Hr1G048510.1	Barley	cytosol	56.13	57.04
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	57.19	56.99
Bra039466.1-P	Field mustard	plastid	57.02	55.06
Bra035716.1-P	Field mustard	cytosol	53.11	51.55
Bra022756.1-P	Field mustard	cytosol	52.22	51.4
Bra030962.1-P	Field mustard	plastid	53.46	45.68
Bra038097.1-P	Field mustard	plastid	54.17	44.72
Bra037899.1-P	Field mustard	nucleus	47.25	43.11
Bra036018.1-P	Field mustard	nucleus	47.42	43.0
Bra003921.1-P	Field mustard	plastid	47.07	42.6
Bra010213.1-P	Field mustard	nucleus	47.07	42.33
Bra007973.1-P	Field mustard	nucleus, plastid	48.31	42.11
Bra028011.1-P	Field mustard	nucleus	46.36	41.76
Bra016132.1-P	Field mustard	plastid	47.07	41.67
Bra027540.1-P	Field mustard	nucleus	46.89	41.31
Bra030788.1-P	Field mustard	nucleus	47.07	41.02
Bra027895.1-P	Field mustard	nucleus	47.96	40.66
Bra024341.1-P	Field mustard	cytosol	27.89	39.45
Bra015920.1-P	Field mustard	cytosol	44.41	39.12
Bra035472.1-P	Field mustard	nucleus	48.67	39.03
Bra031674.1-P	Field mustard	nucleus	47.78	38.76
Bra015260.1-P	Field mustard	mitochondrion, nucleus	47.6	37.07
Bra009045.1-P	Field mustard	nucleus	33.21	36.74
Bra020008.1-P	Field mustard	nucleus	48.67	36.34
Bra028432.1-P	Field mustard	nucleus, plastid	41.56	35.94
Bra028333.1-P	Field mustard	nucleus	31.79	35.24
Bra031892.1-P	Field mustard	nucleus	32.33	35.14
Bra016547.1-P	Field mustard	nucleus	46.18	35.04
Bra041128.1-P	Field mustard	plastid	30.91	32.58
Bra013662.1-P	Field mustard	nucleus	39.79	31.2
Bra001023.1-P	Field mustard	nucleus	41.92	22.18
Bra039147.1-P	Field mustard	nucleus	41.92	21.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra027966	EnsemblPlants:Bra027966.1	EnsemblPlants:Bra027966.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EGQ2	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF176	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002542231	SEG:seg	:	:

Description

AT1G54610 (E=3e-276) | protein kinase family protein

Coordinates

chrA09:-:10193191..10195852

Molecular Weight (calculated)

62491.6 Da

IEP (calculated)

10.029

GRAVY (calculated)

-0.630

Length

563 amino acids

Sequence
(BLAST)

001: MGCVFGREAS SKAAAATTSE IKLAQTSKTG EANGAAAVEV EKKKKKQEEA PKEERKSKGD RRRSKPNPRL SNPSKHWRGE QVAAGWPSWL SDACGEALNG
101: WVPRKADTFE KIDKIGQGTY SNVYKAKDML TGKIVALKKV RFDNLEPESV KFMAREILVL RRLDHPNVVK LEGLVTSRMS CSLYLVFQYM DHDLAGLASS
201: PLVNFSESEV KCLMRQLLSG MEHCHSRGVL HRDIKGSNLL IDDGGVLKIA DFGLATIFDP NHKRPMTSRV VTLWYRAPEL LLGATDYGVG IDLWSAGCIL
301: AELLAGRPIM PGRTEVEQLH KIYKLCGSPS EDYWKKGKFT HGAIYKPREP YKRCIRETFK DFPPASLPLI DSLLSIEPEN RRTATAALES EFFTSDPFAC
401: EPADLPKYPP SKEMDAKRRD EETRRQRAAS KAQGDGARKN RHRERSNRAL PAPEANAELQ SNVDRRRLIT HANAKSKSEK FPPPHQDGGA MGVPLGASQH
501: IDPTFVPPDM ASSFTSTSFN FSKDEPPTQV QTWSGPLGHP ITGISRRKKD STKSSKGKRA VVA

Best Arabidopsis Sequence Match ( AT1G54610.1 )
(BLAST)

001: MGCVFGREAA TTTTAEAKQA KSSKASSGVV VVGESSVTKS NGVIADDVEK KKNEEANGDK ERKSSKGDRR RSTKPNPRLS NPSKHWRGEQ VAAGWPSWLS
101: DACGEALNGW VPRKADTFEK IDKIGQGTYS NVYKAKDMLT GKIVALKKVR FDNLEPESVK FMAREILVLR RLDHPNVVKL EGLVTSRMSC SLYLVFQYMD
201: HDLAGLASSP VVKFSESEVK CLMRQLISGL EHCHSRGVLH RDIKGSNLLI DDGGVLKIAD FGLATIFDPN HKRPMTSRVV TLWYRAPELL LGATDYGVGI
301: DLWSAGCILA ELLAGRPIMP GRTEVEQLHK IYKLCGSPSE DYWKKGKFTH GAIYKPREPY KRSIRETFKD FPPSSLPLID ALLSIEPEDR QTASAALKSE
401: FFTSEPYACE PADLPKYPPS KEIDAKRRDE ETRRQRAASK AQGDGARKNR HRDRSNRALP APEANAELQS NVDRRRLITH ANAKSKSEKF PPPHQDGGAM
501: GVPLGASQHI DPTFIPRDMV PSFTSSSFNF SKDEPPTQVQ TWSGPLGHPI TGVSRKKKDN TKSSKGKRAV VA

Arabidopsis Description

Probable serine/threonine-protein kinase At1g54610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.