Factsheet for Bra024341.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08835	Canola	cytosol	92.71	86.22
VIT_07s0141g00280.t01	Wine grape	cytosol	42.71	68.55
Zm00001d012392_P001	Maize	cytosol	34.67	67.65
EES15089	Sorghum	cytosol	44.97	55.42
Bra031892.1-P	Field mustard	nucleus	66.83	51.35
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	40.95	50.94
Bra009045.1-P	Field mustard	nucleus	64.57	50.49
Bra028333.1-P	Field mustard	nucleus	63.82	50.0
Solyc04g056280.2.1	Tomato	nucleus	61.31	47.66
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	39.95	28.14
Bra027966.1-P	Field mustard	nucleus	39.45	27.89
Bra040637.1-P	Field mustard	plastid	40.2	27.68
Bra022756.1-P	Field mustard	cytosol	39.45	27.45
Bra039466.1-P	Field mustard	plastid	39.95	27.27
Bra035716.1-P	Field mustard	cytosol	39.2	26.9
Bra003921.1-P	Field mustard	plastid	40.7	26.05
Bra016132.1-P	Field mustard	plastid	41.46	25.94
Bra037899.1-P	Field mustard	nucleus	40.2	25.93
Bra010213.1-P	Field mustard	nucleus	40.45	25.72
Bra028011.1-P	Field mustard	nucleus	40.2	25.6
Bra036018.1-P	Field mustard	nucleus	39.2	25.12
Bra015920.1-P	Field mustard	cytosol	40.2	25.04
Bra007973.1-P	Field mustard	nucleus, plastid	40.45	24.92
Bra030962.1-P	Field mustard	plastid	40.95	24.73
Bra027540.1-P	Field mustard	nucleus	39.45	24.57
Bra030788.1-P	Field mustard	nucleus	39.7	24.46
Bra038097.1-P	Field mustard	plastid	40.95	23.9
Bra027895.1-P	Field mustard	nucleus	37.94	22.74
Bra031674.1-P	Field mustard	nucleus	39.2	22.48
Bra028432.1-P	Field mustard	nucleus, plastid	36.68	22.43
Bra035472.1-P	Field mustard	nucleus	37.94	21.51
Bra015260.1-P	Field mustard	mitochondrion, nucleus	38.69	21.3
Bra016547.1-P	Field mustard	nucleus	39.2	21.02
Bra020008.1-P	Field mustard	nucleus	38.69	20.42
Bra013662.1-P	Field mustard	nucleus	35.18	19.5
Bra041128.1-P	Field mustard	plastid	25.63	19.1
Bra001023.1-P	Field mustard	nucleus	36.18	13.53
Bra039147.1-P	Field mustard	nucleus	35.93	13.22
Os01t0201000-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra024341
EnsemblPlants:Bra024341.1	EnsemblPlants:Bra024341.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M4E6D7	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000253F48B	:

Description

AT5G64960 (E=1e-157) CDKC2, CDKC;2 | CDKC2 (Cyclin dependent kinase group C 2); kinase

Coordinates

chrA06:+:15071515..15073972

Molecular Weight (calculated)

45274.7 Da

IEP (calculated)

7.721

GRAVY (calculated)

-0.437

Length

398 amino acids

Sequence
(BLAST)

001: MALAALGKLN LEEAPPIWGS RSVDCFEKIK LISHGTYGEV YMAKEIETGE IVALKKIRTN DEREGFPVTA MREIKILKKL HHRNVINLKE VVYSPSPDND
101: DQRDDNNKYK GEIYMVFEYM DHDLAGLAYR PGTRFTAPQI KCCMKQLLTG LHYCHMKHLL HRDIKGSNLL IDKKGNLKLA DFTLARPLSL DFTGTLTNQV
201: TTLWYRAPEL LLGATEYGPA VDMWSVACLF AELLNGEPIF PGKTEIDQLK KIYELCGAPD ENNWPGVSEM PLYERFKPSL PLKSRVIETY GHFDAHALEL
301: LECMLVLDPP KRISAKDALD SDYFWSEPLP CEPKRLLASY KSPHELQTKK KRKSMPRKTA RGRNWPVKDD GCGIGEVESG GASSSLWCRL LREARTDW

Best Arabidopsis Sequence Match ( AT5G64960.1 )
(BLAST)

001: MAAAAFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIHLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLNGKPI LPGKTENEQL NKIYELCGSP DESNWPGVSK MPWYNQMKSS RPLKRRVREI YRHFDRHALE
301: LLEKMLVLDP SQRICAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQMRHNEE AAKKQKLQHP QQQHSRLPPQ QHGVGQSHAA PLWPAGPNHP
401: MNNNAPPPQI PAGGHYYGGK PRGGAPVPNR YPPSGNQTGG YNNQSRGGYS SGAYPPQGRG APYGAGPRGP SGGYGVGPPN YSQGGGQYGG SGGSGRGQNP
501: MGGARNQQYG WQP

Arabidopsis Description

CDKC-2Cyclin-dependent kinase C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.