Factsheet for Bra016547.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96706	Canola	nucleus	98.92	99.06
CDX83825	Canola	plastid	91.78	97.01
AT1G18670.3	Thale cress	nucleus	82.48	85.0
Bra015920.1-P	Field mustard	cytosol	65.77	76.37
KRH63286	Soybean	nucleus	60.38	66.47
KRH54601	Soybean	plastid	60.78	66.42
VIT_17s0000g06650.t01	Wine grape	plastid	60.92	65.89
KRH56877	Soybean	nucleus, plastid	58.63	64.93
KRH03527	Soybean	nucleus, plastid	58.76	64.21
Solyc03g115660.2.1	Tomato	nucleus	59.16	63.53
PGSC0003DMT400063133	Potato	nucleus	59.16	63.26
GSMUA_Achr6P24660_001	Banana	nucleus	50.94	57.98
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	47.98	53.78
GSMUA_Achr2P13490_001	Banana	nucleus	47.17	53.76
OQU90194	Sorghum	plastid	51.08	53.53
TraesCS2B01G209300.1	Wheat	plastid	49.73	53.32
TraesCS2A01G182800.1	Wheat	plastid	49.73	53.32
TraesCS2D01G190600.1	Wheat	plastid	49.6	53.18
HORVU2Hr1G034440.3	Barley	plastid	49.6	52.95
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	47.3	52.86
GSMUA_Achr4P28060_001	Banana	nucleus	47.57	52.45
Os07t0596600-02	Rice	plasma membrane	49.73	52.19
Zm00001d006759_P012	Maize	plastid	50.67	52.15
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	48.11	51.07
Bra028432.1-P	Field mustard	nucleus, plastid	43.53	49.62
Zm00001d022041_P001	Maize	plastid	49.46	49.0
GSMUA_Achr4P03350_001	Banana	nucleus	43.8	48.73
Bra027966.1-P	Field mustard	nucleus	35.04	46.18
Bra037899.1-P	Field mustard	nucleus	36.93	44.41
Bra030962.1-P	Field mustard	plastid	38.27	43.1
Bra028011.1-P	Field mustard	nucleus	36.12	42.88
Bra009977.1-P	Field mustard	cytosol, nucleus, plastid	32.61	42.83
Bra010213.1-P	Field mustard	nucleus	35.85	42.49
Bra040637.1-P	Field mustard	plastid	33.02	42.39
Bra003921.1-P	Field mustard	plastid	35.44	42.28
Bra035716.1-P	Field mustard	cytosol	33.02	42.24
Bra022756.1-P	Field mustard	cytosol	32.48	42.13
Bra016132.1-P	Field mustard	plastid	35.71	41.67
Bra039466.1-P	Field mustard	plastid	32.61	41.51
Bra038097.1-P	Field mustard	plastid	38.14	41.5
Bra007973.1-P	Field mustard	nucleus, plastid	35.98	41.33
Bra027895.1-P	Field mustard	nucleus	36.93	41.27
Bra036018.1-P	Field mustard	nucleus	34.1	40.74
Bra035472.1-P	Field mustard	nucleus	37.74	39.89
Bra024341.1-P	Field mustard	cytosol	21.02	39.2
Bra027540.1-P	Field mustard	nucleus	33.56	38.97
Bra030788.1-P	Field mustard	nucleus	33.56	38.54
Bra031674.1-P	Field mustard	nucleus	35.71	38.18
Bra041128.1-P	Field mustard	plastid	27.22	37.83
Bra009045.1-P	Field mustard	nucleus	25.47	37.13
Bra028333.1-P	Field mustard	nucleus	25.34	37.01
Bra020008.1-P	Field mustard	nucleus	36.52	35.94
Bra031892.1-P	Field mustard	nucleus	24.8	35.52
Bra015260.1-P	Field mustard	mitochondrion, nucleus	33.69	34.58
Bra013662.1-P	Field mustard	nucleus	27.22	28.13
Bra001023.1-P	Field mustard	nucleus	36.93	25.75
Bra039147.1-P	Field mustard	nucleus	36.93	25.32

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra016547	EnsemblPlants:Bra016547.1	EnsemblPlants:Bra016547.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4DJ69	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF188	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00025470ED	SEG:seg

Description

AT1G18670 (E=0.0) IBS1 | IBS1 (IMPAIRED IN BABA-INDUCED STERILITY 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase

Coordinates

chrA08:+:18990073..18994897

Molecular Weight (calculated)

83291.9 Da

IEP (calculated)

9.295

GRAVY (calculated)

-0.586

Length

742 amino acids

Sequence
(BLAST)

001: MGCVSSKQTV SVTPAIDHSG VFKNNNACSG SGRILDEEPS PAVEKKLVSW RSKSGKKSSS KKKSGGSELG TESGRASSNC RSESLSFRLG NLSKYLEAEQ
101: VAAGWPSWLS NVAGEAIHGW VPFRSDAFEK LEKIGQGTYS SVFRARETET GRIVALKKVK FDNFEPESVR FMAREILILR RLDHPNVIKL QGLVTSKLSC
201: NIHLVFEYME HDLTGLLSSP DISFTTPQIK CYMKQLLSGL DHCHARGVMH RDIKGSNLLV NNEGVLKVAD FGLANFCNAS GSNKQPLTSR VVTLWYRPPE
301: LLLGATEYGA SVDLWSVGCV FAELLLKKPV LQGRTEVEQL HKIFKLCGSP PADYWKKSKL PHAMLFKPQQ HYDGCLRETL KDLSEADITL IDTLLSVEPH
401: KRGTASAALV SQYFTSEPFA CDPSSLPVYS PSKEIDAKHR EDATRKKISG NGRRGTEVRK PTRKPPAFAK LPPPNCVQDA RRPSQTLQKR YGHSVHNSID
501: SEASLYGKLQ NPSSEHEKEE ASSHVKHASQ GDVPFSGPLQ VSVSSGFAWA KRRKDGSHNR SLSRGYIPNL LGPSPAFSES TDVESKINQN EKEEKDSQDR
601: EAYEMLKLSM LKKWRQLNRP DSFDASDEYH SQELSLTLYQ REEKSAKLNH LGYEDNDEKI EFSGPLLSQS YGVDELLKRQ ERQIRQLVRK SLFQKAYVLF
701: EDLIYQKEME IAPLEFQVQA YRYKLLSLRL TDVNRGRISF PK

Best Arabidopsis Sequence Match ( AT1G18670.3 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKTMMLI TNKKKRMFYD

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.