CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54601	Soybean	plastid	92.88	92.19
KRH56877	Soybean	nucleus, plastid	79.08	79.55
KRH03527	Soybean	nucleus, plastid	79.08	78.5
CDY71137	Canola	plastid	48.07	74.31
VIT_17s0000g06650.t01	Wine grape	plastid	74.93	73.62
Solyc03g115660.2.1	Tomato	nucleus	69.73	68.02
PGSC0003DMT400063133	Potato	nucleus	69.88	67.87
CDX83825	Canola	plastid	67.06	64.39
CDX81891	Canola	plastid	66.62	64.33
Bra015920.1-P	Field mustard	cytosol	60.98	64.32
CDX73077	Canola	cytosol	60.83	64.16
CDX96534	Canola	cytosol	60.53	63.85
AT1G74330.1	Thale cress	nucleus	66.17	63.81
AT1G18670.3	Thale cress	nucleus	68.1	63.75
GSMUA_Achr6P24660_001	Banana	nucleus	59.05	61.04
CDX96706	Canola	nucleus	66.91	60.86
Bra016547.1-P	Field mustard	nucleus	66.47	60.38
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	58.31	59.37
TraesCS2A01G182800.1	Wheat	plastid	58.75	57.23
TraesCS2B01G209300.1	Wheat	plastid	58.61	57.08
TraesCS2D01G190600.1	Wheat	plastid	58.46	56.94
Os07t0596600-02	Rice	plasma membrane	59.64	56.86
HORVU2Hr1G034440.3	Barley	plastid	58.61	56.83
OQU90194	Sorghum	plastid	58.9	56.07
GSMUA_Achr2P13490_001	Banana	nucleus	53.86	55.76
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	54.75	55.57
GSMUA_Achr4P03350_001	Banana	nucleus	54.9	55.47
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	57.42	55.36
GSMUA_Achr4P28060_001	Banana	nucleus	54.9	54.98
Zm00001d006759_P012	Maize	plastid	58.31	54.51
KRH18441	Soybean	nucleus	47.18	54.17
KRG93581	Soybean	plastid	46.74	53.75
KRH11268	Soybean	cytosol	41.69	51.94
KRH21021	Soybean	cytosol	41.54	51.85
Zm00001d022041_P001	Maize	plastid	57.27	51.54
KRH02197	Soybean	nucleus	41.25	50.92
KRH50926	Soybean	nucleus	41.39	50.91
KRG96918	Soybean	cytosol	42.14	49.65
KRH34013	Soybean	nucleus	42.28	49.14
KRG92786	Soybean	nucleus	42.28	49.14
KRH01235	Soybean	nucleus, plastid	48.52	48.59
KRH44946	Soybean	nucleus	48.81	48.53
KRH68662	Soybean	nucleus	42.43	48.31
KRH54127	Soybean	mitochondrion	39.47	47.59
KRH59775	Soybean	nucleus	38.13	46.31
KRH41090	Soybean	cytosol	37.98	46.13
KRH63826	Soybean	cytosol	24.78	45.75
KRH53817	Soybean	nucleus	32.2	44.11
KRH64126	Soybean	nucleus	32.05	43.2
KRH55283	Soybean	nucleus	45.25	42.96
KRH27243	Soybean	nucleus	44.96	42.8
KRH22087	Soybean	nucleus	44.96	42.56
KRH06043	Soybean	nucleus	36.65	42.51
KRH59494	Soybean	nucleus	26.26	42.45
KRH27807	Soybean	nucleus	38.13	41.25
KRH26151	Soybean	nucleus	44.66	41.18
KRH77684	Soybean	nucleus	38.58	41.01
KRH26282	Soybean	nucleus	42.88	40.76
KRH25594	Soybean	nucleus	41.84	40.58
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	28.34	40.38
KRH55951	Soybean	nucleus	41.39	40.09
KRH26956	Soybean	nucleus	39.17	37.93
KRG89779	Soybean	nucleus	29.23	37.88
KRH73489	Soybean	nucleus	28.64	37.4
KRH22379	Soybean	nucleus	38.87	37.27
KRH14656	Soybean	nucleus	28.34	37.02
KRH35103	Soybean	nucleus	32.34	36.15

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100796719	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EMBL:ACUP02002662	EnsemblPlantsGene:GLYMA_04G165600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	UniProt:I1JWR6	InterPro:IPR000719	ProteinID:KRH63284.1
ProteinID:KRH63285.1	EnsemblPlants:KRH63286	ProteinID:KRH63286	ProteinID:KRH63286.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A395	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:41483827..41491204

Molecular Weight (calculated)

75790.9 Da

IEP (calculated)

9.442

GRAVY (calculated)

-0.615

Length

674 amino acids

Sequence
(BLAST)

001: MGCVSSKQAV SVTPAIDHYG AFRSNAGGPC EPEKKRTESG GGPSQSEVGE SGRTSSNCES LSFRLGNLQK YVQGEHVAAG WPAWLSAVAG EAIQGWVPLR
101: ADAFEKLEKI GQGTYSSVFR ARELETRKIV ALKKVRFDNF EPESVRFMAR EILILRRLDH PNIIKLEGLI TSRLSCSIYL VFEYMEHDIT GLLSSPDIKF
201: TEPQIKCYMK QLLAGLEHCH LRGVMHRDIK GSNLLVNNEG VLKVADFGLA NYVNSGHRQP LTSRVVTLWY RPPELLLGST DYDPSVDLWS VGCVFAELLV
301: GKPILQGRTE VEQLHKIFKL CGSPPDEYWK KSKLPHATLF KPEQPYDSCL RQSFKDLPTT SVHLLQTLLS VEPYKRGTAT SALSSEYFKT KPYACDPSSL
401: PVYPPSKEID AKHRDESRKK ISGRVRGTAT RKPSRKPLGF NKLAPAEGLA SQTQTSQKVN GRSFHILEEE KIKIGDKAQK SSSGKPEDAF HMKNASQGDI
501: PLSGPLQVST SSGFAWAKSR KDDTSFRSHC RTISRGHIFN ALEPSTLNTR NNLDTTNQEN KEFCGRYPNS RGHDLLEISK LSMQNQWSKF DRPDSFDASD
601: EYHSQELSTA LYHREDSVSK RSNLTFQDQG EKVEFSGPLL SQMHTVDELL ERHERHIRRT VRRSWFQRGK KLGK

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.