CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96706	Canola	nucleus	97.01	91.9
Bra016547.1-P	Field mustard	nucleus	97.01	91.78
CDY71137	Canola	plastid	55.7	89.68
CDX81891	Canola	plastid	85.04	85.53
AT1G18670.3	Thale cress	nucleus	87.46	85.28
CDX96534	Canola	cytosol	69.8	76.68
CDX73077	Canola	cytosol	69.66	76.53
KRH63286	Soybean	nucleus	64.39	67.06
KRH54601	Soybean	plastid	64.53	66.72
VIT_17s0000g06650.t01	Wine grape	plastid	65.1	66.62
KRH56877	Soybean	nucleus, plastid	62.68	65.67
KRH03527	Soybean	nucleus, plastid	62.82	64.95
Solyc03g115660.2.1	Tomato	nucleus	63.68	64.69
PGSC0003DMT400063133	Potato	nucleus	63.68	64.41
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	24.22	61.59
GSMUA_Achr6P24660_001	Banana	nucleus	54.42	58.59
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	51.42	54.53
GSMUA_Achr2P13490_001	Banana	nucleus	50.57	54.53
OQU90194	Sorghum	plastid	54.7	54.24
TraesCS2A01G182800.1	Wheat	plastid	53.13	53.9
TraesCS2B01G209300.1	Wheat	plastid	53.13	53.9
TraesCS2D01G190600.1	Wheat	plastid	52.99	53.76
HORVU2Hr1G034440.3	Barley	plastid	52.99	53.53
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	50.43	53.31
GSMUA_Achr4P28060_001	Banana	nucleus	50.85	53.05
Os07t0596600-02	Rice	plasma membrane	52.85	52.48
Zm00001d006759_P012	Maize	plastid	53.7	52.29
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	51.71	51.93
CDY37004	Canola	nucleus	46.15	49.85
GSMUA_Achr4P03350_001	Banana	nucleus	46.87	49.33
Zm00001d022041_P001	Maize	plastid	52.42	49.13
CDY54916	Canola	mitochondrion	22.51	47.88
CDY72385	Canola	cytosol	11.25	47.02
CDX74463	Canola	nucleus	40.88	46.74
CDY48795	Canola	nucleus	33.9	46.39
CDY67158	Canola	plastid	37.04	45.94
CDX95237	Canola	nucleus	36.89	45.36
CDX99520	Canola	nucleus	39.17	44.79
CDX86879	Canola	nucleus	38.89	44.25
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	32.76	43.64
CDY02525	Canola	plastid	40.6	43.18
CDY25738	Canola	nucleus, plastid	40.46	43.1
CDX71637	Canola	cytosol	35.47	42.93
CDX74282	Canola	plastid	37.89	42.7
CDY70545	Canola	nucleus	38.03	42.65
CDY05828	Canola	cytosol	35.19	42.51
CDY15287	Canola	nucleus	37.32	42.39
CDY70577	Canola	nucleus	37.75	42.33
CDX93753	Canola	nucleus	37.61	42.31
CDX86178	Canola	cytosol, nucleus, plastid	34.05	42.3
CDY45813	Canola	cytosol	34.47	42.23
CDY58380	Canola	nucleus	35.19	42.15
CDY18783	Canola	plastid	34.62	42.04
CDY53230	Canola	nucleus, plastid	34.9	41.95
CDX80672	Canola	cytosol, plastid	34.05	41.78
CDY34698	Canola	plastid	37.32	41.65
CDX68307	Canola	plastid	36.61	41.65
CDY25881	Canola	plastid	40.46	41.64
CDY55799	Canola	plastid	37.18	41.63
CDX72813	Canola	plastid	37.46	41.35
CDX93496	Canola	nucleus	39.74	41.33
CDY36688	Canola	plastid	36.18	41.17
CDY50511	Canola	nucleus, plastid	40.46	41.1
CDX96330	Canola	plastid	37.18	41.04
CDY53144	Canola	nucleus	39.17	40.98
CDY14916	Canola	nucleus	36.18	40.9
CDX84882	Canola	cytosol	34.62	40.84
CDY27801	Canola	cytosol	33.9	40.82
CDY66485	Canola	nucleus	36.18	40.77
CDY31800	Canola	nucleus	39.17	40.5
CDY13111	Canola	nucleus	35.19	40.23
CDY03697	Canola	nucleus, plastid	37.18	40.22
CDY41930	Canola	cytosol	33.62	40.2
CDY29169	Canola	nucleus	37.89	40.12
CDY39924	Canola	nucleus	37.89	40.12
CDY31076	Canola	nucleus	35.9	39.87
CDY67268	Canola	nucleus, plastid	36.75	39.69
CDY60604	Canola	nucleus	35.61	39.31
CDY20858	Canola	nucleus	35.61	39.12
CDY33146	Canola	nucleus	35.61	39.12
CDY10826	Canola	nucleus	29.63	38.95
CDY20686	Canola	nucleus	36.04	38.51
CDY56227	Canola	nucleus	26.92	37.06
CDX96988	Canola	nucleus	26.78	36.94
CDX69849	Canola	nucleus	26.78	36.94
CDY08835	Canola	cytosol	22.36	36.68
CDY18101	Canola	cytosol	23.5	35.79
CDY33994	Canola	nucleus	26.35	35.78
CDY31293	Canola	nucleus	26.21	35.52
CDX67429	Canola	cytosol, plastid	46.01	34.81
CDX89871	Canola	mitochondrion, nucleus	35.76	34.72
CDY41270	Canola	cytosol	27.07	33.75
CDY18179	Canola	nucleus	35.61	33.65
CDY22631	Canola	mitochondrion	37.75	31.81
CDY06363	Canola	mitochondrion	37.32	31.38
CDY50891	Canola	nucleus, plastid	39.03	28.63
CDX91965	Canola	nucleus	39.17	26.54
CDY37546	Canola	nucleus	39.17	26.29
CDY14526	Canola	cytosol	25.36	24.79
CDY43266	Canola	nucleus	36.32	23.9

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:A0A078D3T6	EnsemblPlants:CDX83825	ProteinID:CDX83825
ProteinID:CDX83825.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00139581001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF188
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDCD79
SEG:seg	:	:	:	:	:

Description

BnaC08g18200D

Coordinates

chrLK031834:+:663749..667196

Molecular Weight (calculated)

78346.7 Da

IEP (calculated)

9.179

GRAVY (calculated)

-0.626

Length

702 amino acids

Sequence
(BLAST)

001: MGCVSSKQTV SVTPAIDHSG VFKNNNACSG SGRVVVEEPS PAVEKKLVSW RSKSGKKSSS KKKSGGSELG TESGRASSNC RSESLSFRLG NLSKYLEAEQ
101: VAAGWPSWLS NVAGEAIHGW VPFRSDAFEK LEKIGQGTYS SVFRARETET GRIVALKKVK FDNFEPESVR FMAREILILR RLDHPNVIKL QGLVTSNLSC
201: NIHLVFEYME HDLTGLLSSP DVSFTTPQIK CYMKQLLSGL DHCHARGVMH RDIKGSNLLV NNEGVLKVAD FGLANFCNAS GNNKQQPLTS RVVTLWYRPP
301: ELLLGATEYG ASVDLWSVGC VFAELLLKKP VLQGRTEVEQ LHKIFKLCGS PPADYWKKSK LPHAMLFKPQ QHYDGCLGET LKDLSEADIT LIETLLSVEP
401: HKRGTASTAL VSQYFTSEPF ACDPSSLPVY SPSKEIDAKH REDATRKKIS GNGRRGTEVR KPTRKPPAFA KLPPPNCVQD ARRPSQTFQK RYGHSVHNSI
501: DSEASLYGKL QNPSSEHEKE EASSHVKHAS QGDVPFSGPL QVSVSSGFAW AKRRKDGSHN RSLSRGYIPN LLGPSPAFSE STDVESKINE NEKEEKDSQD
601: REAYEMLKLS MLKKWRQLER PDSFDASDEY HSQELSLALY QREEKSAKLN HLGYEDNDEK IEFSGPLLSQ SYGVDELLER QERKIRQLVR KSLFQKGRKQ
701: GK

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.