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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 2
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27801 Canola cytosol 96.08 96.74
CDY53230 Canola nucleus, plastid 83.3 83.73
CDY18783 Canola plastid 81.77 83.05
AT3G05050.1 Thale cress nucleus, plastid 82.28 81.45
Os07t0668000-00 Rice cytosol, plasma membrane 3.92 74.19
CDX80672 Canola cytosol, plastid 70.87 72.73
CDX86178 Canola cytosol, nucleus, plastid 69.85 72.57
CDX94278 Canola cytosol, mitochondrion, nucleus, plasma membrane 27.77 59.06
KRH34013 Soybean nucleus 57.75 58.45
TraesCS2D01G120200.1 Wheat nucleus 47.36 58.4
KRG96918 Soybean cytosol 56.73 58.22
Solyc01g098160.2.1 Tomato nucleus 56.73 57.91
PGSC0003DMT400057839 Potato cytosol 56.73 57.81
KRG92786 Soybean nucleus 56.73 57.41
CDY67158 Canola plastid 55.2 57.24
Zm00001d047482_P001 Maize nucleus 53.15 56.93
Zm00001d029143_P003 Maize nucleus 52.64 56.49
KRH68662 Soybean nucleus 56.9 56.42
CDX95237 Canola nucleus 54.86 56.39
TraesCS2A01G119300.1 Wheat nucleus 54.17 56.18
OQU92600 Sorghum nucleus 53.83 56.03
TraesCS4B01G151800.1 Wheat nucleus 52.13 55.84
TraesCS2B01G139000.1 Wheat nucleus 54.0 55.52
Zm00001d007111_P001 Maize plastid 54.17 55.5
KXG36890 Sorghum plastid 53.66 55.07
TraesCS4D01G151100.1 Wheat nucleus 51.96 55.05
Zm00001d022499_P001 Maize plastid 53.49 54.99
TraesCS4A01G142300.1 Wheat nucleus 51.79 54.87
VIT_14s0030g01260.t01 Wine grape cytosol, nucleus, plastid 54.34 54.81
CDY54916 Canola mitochondrion 28.28 50.3
CDY71137 Canola plastid 36.63 49.31
HORVU4Hr1G048510.1 Barley cytosol 46.51 49.28
HORVU2Hr1G020680.2 Barley cytosol 40.89 48.88
CDY05828 Canola cytosol 48.21 48.71
CDY45813 Canola cytosol 47.53 48.69
CDX71637 Canola cytosol 47.53 48.1
CDX84882 Canola cytosol 47.53 46.89
CDX99109 Canola cytosol, mitochondrion, nucleus, plastid 40.37 44.97
CDY72385 Canola cytosol 12.61 44.05
CDY48795 Canola nucleus 37.82 43.27
CDY25738 Canola nucleus, plastid 46.85 41.73
CDX99520 Canola nucleus 43.61 41.69
CDY02525 Canola plastid 46.85 41.67
CDX86879 Canola nucleus 43.61 41.49
CDY58380 Canola nucleus 41.23 41.3
CDX68307 Canola plastid 42.59 40.52
CDY36688 Canola plastid 42.25 40.19
CDY15287 Canola nucleus 42.25 40.13
CDY31076 Canola nucleus 43.1 40.03
CDY25881 Canola plastid 46.51 40.03
CDX96330 Canola plastid 43.27 39.94
CDX93753 Canola nucleus 42.42 39.9
CDY13111 Canola nucleus 41.74 39.9
CDY70545 Canola nucleus 42.42 39.78
CDY70577 Canola nucleus 42.42 39.78
CDX72813 Canola plastid 42.93 39.62
CDY53144 Canola nucleus 45.14 39.49
CDY50511 Canola nucleus, plastid 46.34 39.36
CDY03697 Canola nucleus, plastid 43.44 39.29
CDY39924 Canola nucleus 44.29 39.22
CDY31800 Canola nucleus 45.32 39.18
CDY14916 Canola nucleus 41.4 39.13
CDY29169 Canola nucleus 44.12 39.06
CDY66485 Canola nucleus 41.4 39.0
CDY60604 Canola nucleus 42.25 38.99
CDY10826 Canola nucleus 35.43 38.95
CDY20686 Canola nucleus 43.44 38.81
CDY33146 Canola nucleus 42.08 38.65
CDY20858 Canola nucleus 42.08 38.65
CDY67268 Canola nucleus, plastid 42.76 38.62
CDX93496 Canola nucleus 44.12 38.37
CDY08835 Canola cytosol 27.43 37.62
CDX73077 Canola cytosol 39.52 36.31
CDX96534 Canola cytosol 39.35 36.15
CDX96988 Canola nucleus 30.66 35.36
CDX69849 Canola nucleus 30.49 35.17
CDY56227 Canola nucleus 30.32 34.9
CDX74282 Canola plastid 36.63 34.51
CDY33994 Canola nucleus 30.32 34.43
CDX81891 Canola plastid 40.89 34.38
CDY31293 Canola nucleus 30.32 34.36
CDY55799 Canola plastid 36.46 34.13
CDY34698 Canola plastid 36.46 34.02
CDY37004 Canola nucleus 37.65 34.0
CDX89871 Canola mitochondrion, nucleus 41.57 33.75
CDX83825 Canola plastid 40.2 33.62
CDY18101 Canola cytosol 26.06 33.19
CDY18179 Canola nucleus 41.4 32.71
CDY41270 Canola cytosol 31.01 32.33
CDX96706 Canola nucleus 40.72 32.25
CDX74463 Canola nucleus 32.37 30.94
CDY06363 Canola mitochondrion 43.61 30.66
CDY22631 Canola mitochondrion 43.1 30.37
CDY50891 Canola nucleus, plastid 43.61 26.75
CDX67429 Canola cytosol, plastid 37.82 23.92
CDY14526 Canola cytosol 28.96 23.68
CDY37546 Canola nucleus 37.65 21.13
CDX91965 Canola nucleus 37.14 21.04
CDY43266 Canola nucleus 34.75 19.12
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.3.1.8Gene3D:3.30.200.20GO:A0A078HTP5UniProt:A0A078HTP5EnsemblPlants:CDY41930
ProteinID:CDY41930ProteinID:CDY41930.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00073915001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24056
PANTHER:PTHR24056:SF319InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EEC300SEG:seg::::
Description
BnaC05g46740DBnaC05g46740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTP5]
Coordinates
chrLK032510:-:217782..220979
Molecular Weight (calculated)
65957.7 Da
IEP (calculated)
9.795
GRAVY (calculated)
-0.649
Length
587 amino acids
Sequence
(BLAST)
001: MGCVLSRPGS SGLVSESREE ASTRIESNRK EANNVSVTTT ESTSVAVVVS STGEEVRNGE AIVEDHKEEN GDVKEKKPKG ERKKSTTKPD PRLSNPPKNL
101: PGEQVAAGWP PWLTEVCGEA LNGWLPRKAD SFEKIEKIGS GTYSNVYKAR DSLTGAIVAL KKVRCETMEQ ENLKFMAREI LILRRLNHPN VIKLEGLVTS
201: RMSNSLYLVF RYMHHDLAGL AASPVITFTE QQVKCYMKQI LSGLEHCHSR GVLHRDIKGS NLLIDDDGVL RIGDFGLATF FDASIRQKMT TRVVTLWYRA
301: PELLHGAVEY GVGIDLWSAG CILAELLSGR PIMPGRNEVD QIHRIYKLCG SPSEEYWRKI RLPSHVKHAN HTAKAQHKRK VREEFKNFSP EALSLVDRLL
401: ALDPLERLTA TDALTSDFFT TEPFACEPSE LPKYPPTKEI DAKKRDEEYR RQREVRKVQG ESGRRIRPRD RAPRAMPAPE ANAENQSNID RMRLITHANA
501: KSKSEKFPPP HQDGSLGYQV GSSRRLDPSE IPFSSNSFTA TYSKEPFQTW SGPLAPTEAH DSTAKRMKDI NKERRKAAKL KGKRIVV
Best Arabidopsis Sequence Match ( AT3G05050.1 )
(BLAST)
001: MGCVLGRPGS SGSVSGSRDE VSTRIESNRH QVNNVSVTKT ETTESTSAVV VASASNGEEV RNHEDVVDQK KENGFVVTEA KERKSKGERK RSKPPDPRRS
101: NPPKNLLGEQ VAAGWPSWLS EVCGEALSGW LPRKADSFEK IDKIGSGTYS NVYKAKDSLT GNIVALKKVR CDVNERESLK FMAREILILR RLDHPNVIKL
201: EGLVTSRMSS SLYLVFRYMD HDLAGLAASP EIKFTEQQVK CYMKQLLSGL EHCHNRGVLH RDIKGSNLLI DDGGVLRIGD FGLATFFDAS KRQEMTNRVV
301: TLWYRSPELL HGVVEYSVGV DLWSAGCILA ELLAGRAIMP GRNEVEQLHR IYKLCGSPSE EYWKKIRLPS THKHAHHKPL PQYKRRIREV YKDFSPEALS
401: LLDTLLALDP AERQTATDVL MSDFFTTEPL ACQPSDLPKY PPSKEIDAKR RDEEYRRQRE ARKAQGESGR RMRPRERAPR AMPAPEANAE NQSNIDRMRM
501: ITHANAKSKS EKFPPPHQDG SLGFQVGSSR RLDPSEIPYS TNSFTSSYSK EPFQTWSGPL APIGAPDSTT RRRNDINKER RMASKVKGKR IVV
Arabidopsis Description
At3g05050/T12H1_1 [Source:UniProtKB/TrEMBL;Acc:Q9MAB4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.