CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89871	Canola	mitochondrion, nucleus	92.19	94.74
AT1G03740.1	Thale cress	nucleus	78.87	79.19
CDX99109	Canola	cytosol, mitochondrion, nucleus, plastid	49.39	69.64
CDY54916	Canola	mitochondrion	30.42	68.48
CDY13111	Canola	nucleus	56.53	68.4
CDY66485	Canola	nucleus	57.2	68.22
CDY14916	Canola	nucleus	56.8	67.95
CDY60604	Canola	nucleus	57.87	67.61
CDY20858	Canola	nucleus	57.74	67.14
CDY33146	Canola	nucleus	57.74	67.14
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	21.94	59.06
CDY71137	Canola	plastid	31.22	53.21
CDY10826	Canola	nucleus	34.19	47.57
CDY67158	Canola	plastid	36.2	47.53
CDX95237	Canola	nucleus	36.34	47.29
CDY02525	Canola	plastid	41.86	47.12
CDY25738	Canola	nucleus, plastid	41.72	47.04
Solyc07g053910.2.1	Tomato	nucleus, plastid	44.41	46.09
CDY25881	Canola	plastid	42.13	45.89
CDY48795	Canola	nucleus	31.63	45.81
KRH25594	Soybean	nucleus	42.8	45.76
KRH55951	Soybean	nucleus	42.8	45.69
PGSC0003DMT400047231	Potato	nucleus	43.88	45.47
Solyc10g008280.2.1	Tomato	nucleus	41.59	45.44
CDY50511	Canola	nucleus, plastid	42.13	45.3
PGSC0003DMT400034197	Potato	nucleus	41.05	45.25
KRH26956	Soybean	nucleus	42.26	45.11
CDY45813	Canola	cytosol	34.45	44.68
CDX80672	Canola	cytosol, plastid	34.32	44.58
KRH22379	Soybean	nucleus	42.13	44.52
CDX86178	Canola	cytosol, nucleus, plastid	33.78	44.42
CDX71637	Canola	cytosol	34.59	44.31
CDY05828	Canola	cytosol	34.59	44.23
CDY58380	Canola	nucleus	34.45	43.69
CDX99520	Canola	nucleus	36.07	43.65
CDX86879	Canola	nucleus	36.07	43.44
CDY18783	Canola	plastid	33.51	43.08
CDX84882	Canola	cytosol	34.32	42.86
CDY53230	Canola	nucleus, plastid	33.38	42.47
CDY72385	Canola	cytosol	9.56	42.26
CDY70577	Canola	nucleus	35.53	42.17
CDY70545	Canola	nucleus	35.4	42.01
CDX68307	Canola	plastid	34.72	41.82
CDY27801	Canola	cytosol	32.57	41.51
CDX93496	Canola	nucleus	37.69	41.48
CDY41930	Canola	cytosol	32.71	41.4
CDY36688	Canola	plastid	34.32	41.33
CDX93753	Canola	nucleus	34.59	41.19
CDY29169	Canola	nucleus	36.74	41.18
CDY31076	Canola	nucleus	34.99	41.14
CDY53144	Canola	nucleus	37.15	41.13
CDY39924	Canola	nucleus	36.61	41.03
CDY15287	Canola	nucleus	34.05	40.94
CDY31800	Canola	nucleus	37.28	40.8
CDX96330	Canola	plastid	34.86	40.72
CDX72813	Canola	plastid	34.72	40.57
CDY41270	Canola	cytosol	30.42	40.14
CDY03697	Canola	nucleus, plastid	34.99	40.06
CDY67268	Canola	nucleus, plastid	34.59	39.54
CDY20686	Canola	nucleus	34.86	39.42
CDX73077	Canola	cytosol	32.3	37.56
CDX96534	Canola	cytosol	32.17	37.4
CDX81891	Canola	plastid	34.72	36.96
CDX96988	Canola	nucleus	24.9	36.35
CDY56227	Canola	nucleus	24.9	36.27
CDX69849	Canola	nucleus	24.76	36.15
CDX74282	Canola	plastid	30.01	35.79
CDY37004	Canola	nucleus	31.22	35.69
CDX83825	Canola	plastid	33.65	35.61
CDY18101	Canola	cytosol	22.07	35.57
CDY08835	Canola	cytosol	20.46	35.51
CDY34698	Canola	plastid	29.48	34.82
CDY33994	Canola	nucleus	24.23	34.82
CDY31293	Canola	nucleus	24.09	34.56
CDY55799	Canola	plastid	29.07	34.45
CDX74463	Canola	nucleus	28.4	34.36
CDX96706	Canola	nucleus	33.51	33.6
CDY22631	Canola	mitochondrion	36.34	32.41
CDY06363	Canola	mitochondrion	36.2	32.22
CDY50891	Canola	nucleus, plastid	37.69	29.26
CDX67429	Canola	cytosol, plastid	31.09	24.89
CDY14526	Canola	cytosol	22.48	23.26
CDX91965	Canola	nucleus	30.01	21.53
CDY37546	Canola	nucleus	29.88	21.22
CDY43266	Canola	nucleus	27.46	19.12

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:A0A078FYG0	UniProt:A0A078FYG0	EnsemblPlants:CDY18179
ProteinID:CDY18179	ProteinID:CDY18179.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00002705001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24056	PANTHER:PTHR24056:SF326	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEB19E	SEG:seg	:	:	:

Description

BnaC05g02020DBnaC05g02020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYG0]

Coordinates

chrLK032083:+:181675..184984

Molecular Weight (calculated)

84908.3 Da

IEP (calculated)

9.579

GRAVY (calculated)

-0.685

Length

743 amino acids

Sequence
(BLAST)

001: MGCVGSKQRP FRRKSTLLSE KRSSRFDSSR IDEWIQPQVV FDRSSSRRDA KDSKLIESEM LSSNRYYCDH QVEKIHDQEL RKASSPVVKP DLEIGPKGIE
101: PKLDRWNSID SKVRLIEFEK LSSKRLSDHH QIDKEPEVQA VVPRELSKKQ SVAAAPKDTE LKQLVSAGWP TWLVSVAGEA LVDWAPRRAS TFEKLEKIGQ
201: GTYSSVYRAR DLTHNKIVAL KKVRFDLNDI ESVKFMAREI IVMRRLDHPN VLKLEGLITA PVSSSLYLVF DYMDHDLLGL SSLPGVEFTE PQVKCYMRQL
301: LSGLEHCHSR GVLHRDIKGS NLLIDGNGVL KIADFGLATF FDPKAKTVAL TSHVVTLWYR PPELLLGASH YGVGVDLWST GCILGELYAG KPILPGKTEF
401: GLKRFNEVFG FTDSSVKFLV EQLHKIFKLC GSPTESYWRK HNLPSSAGFR TAIPYRRKLS EMYKDFPESV LLLLETLLSI DPDHRSSASS ALESEYFKTK
501: PLACDPSCLP KYPPSKEIDA KLRDDEEKKQ RPEKQERQDS QGRRSHERKA IPPIRANHSL SMSMDKPYLD LKSRNESFKS FKEERTSHVP APDYPNMQTR
601: NNQSGERVSY SGPLMINRNV AKSTMYVKEN APPPRYPPSR VNPRVLSGSV SSKALLDQPV MNQRRRDKRA YNRADTMDSR HMTIPIDPSW YNPSDSKIYT
701: SGPLLEQPSR VDQMLEEHDR QLQEFSRQEQ KAREDKTDKC EQS

Best Arabidopsis Sequence Match ( AT1G03740.1 )
(BLAST)

001: MGCVNSRHRP FRRKSTTLKE SSEEKRSSRI DSSRRIDDWI QPEDGFDRLS NSGDAKVRLI ESEMFSTSRC HDHQIGKILE NPATVAHMDR VVHDQELRRA
101: SSAVVDSDLD IDPKVVKAKL DRWNSKDSKV RLIESEKLSS SMFSEHHQIE KGVEKPEVEA SVRVVHRELK RGSSIVSPKD AERKQVAAGW PSWLVSVAGE
201: SLVDWAPRRA NTFEKLEKIG QGTYSSVYRA RDLLHNKIVA LKKVRFDLND MESVKFMARE IIVMRRLDHP NVLKLEGLIT APVSSSLYLV FEYMDHDLLG
301: LSSLPGVKFT EPQVKCYMRQ LLSGLEHCHS RGVLHRDIKG SNLLIDSKGV LKIADFGLAT FFDPAKSVSL TSHVVTLWYR PPELLLGASH YGVGVDLWST
401: GCILGELYAG KPILPGKTEV EQLHKIFKLC GSPTENYWRK QKLPSSAGFK TAIPYRRKVS EMFKDFPASV LSLLETLLSI DPDHRSSADR ALESEYFKTK
501: PFACDPSNLP KYPPSKEIDA KMRDEAKRQQ PMRAEKQERQ DSMTRISHER KFVPPVKANN SLSMTMEKQY KDLRSRNDSF KSFKEERTPH GPVPDYQNMQ
601: HNRNNQTGVR ISHSGPLMSN RNMAKSTMHV KENALPRYPP ARVNPKMLSG SVSSKTLLER QDQPVTNQRR RDRRAYNRAD TMDSRHMTAP IDPSWYNPSD
701: SKIYMSGPLL AQPSRVDQML EEHDRQLQEF NRQALKTPQG

Arabidopsis Description

F21B7.34 [Source:UniProtKB/TrEMBL;Acc:Q9LR53]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.