CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03527	Soybean	nucleus, plastid	95.07	93.81
KRH63286	Soybean	nucleus	79.55	79.08
KRH54601	Soybean	plastid	79.85	78.79
CDY71137	Canola	plastid	48.36	74.31
VIT_17s0000g06650.t01	Wine grape	plastid	72.09	70.41
Solyc03g115660.2.1	Tomato	nucleus	70.3	68.16
PGSC0003DMT400063133	Potato	nucleus	70.0	67.58
CDX81891	Canola	plastid	65.82	63.18
AT1G74330.1	Thale cress	nucleus	65.67	62.95
Bra015920.1-P	Field mustard	cytosol	60.0	62.91
CDX73077	Canola	cytosol	59.85	62.75
CDX83825	Canola	plastid	65.67	62.68
AT1G18670.3	Thale cress	nucleus	67.31	62.64
CDX96534	Canola	cytosol	59.55	62.44
GSMUA_Achr6P24660_001	Banana	nucleus	58.66	60.28
CDX96706	Canola	nucleus	65.37	59.11
Bra016547.1-P	Field mustard	nucleus	64.93	58.63
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	57.76	58.46
GSMUA_Achr2P13490_001	Banana	nucleus	55.07	56.68
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	55.67	56.17
GSMUA_Achr4P28060_001	Banana	nucleus	55.07	54.83
KRG93581	Soybean	plastid	47.76	54.61
TraesCS2B01G209300.1	Wheat	plastid	56.27	54.48
TraesCS2D01G190600.1	Wheat	plastid	56.12	54.34
TraesCS2A01G182800.1	Wheat	plastid	56.12	54.34
Os07t0596600-02	Rice	plasma membrane	57.31	54.31
KRH18441	Soybean	nucleus	47.31	54.0
HORVU2Hr1G034440.3	Barley	plastid	55.97	53.96
OQU90194	Sorghum	plastid	57.01	53.95
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	55.82	53.51
GSMUA_Achr4P03350_001	Banana	nucleus	52.99	53.22
KRH11268	Soybean	cytosol	42.39	52.5
Zm00001d006759_P012	Maize	plastid	56.42	52.43
KRH21021	Soybean	cytosol	42.09	52.22
KRH02197	Soybean	nucleus	41.64	51.1
KRH50926	Soybean	nucleus	41.79	51.09
KRG96918	Soybean	cytosol	42.84	50.17
Zm00001d022041_P001	Maize	plastid	55.82	49.93
KRH01235	Soybean	nucleus, plastid	48.96	48.74
KRH54127	Soybean	mitochondrion	40.45	48.48
KRH34013	Soybean	nucleus	41.94	48.45
KRH44946	Soybean	nucleus	48.96	48.38
KRH63826	Soybean	cytosol	26.27	48.22
KRH68662	Soybean	nucleus	42.54	48.14
KRG92786	Soybean	nucleus	41.34	47.76
KRH41090	Soybean	cytosol	39.4	47.57
KRH59775	Soybean	nucleus	39.4	47.57
KRH53817	Soybean	nucleus	31.79	43.29
KRH55283	Soybean	nucleus	45.82	43.24
KRH27243	Soybean	nucleus	45.52	43.08
KRH22087	Soybean	nucleus	45.52	42.84
KRH06043	Soybean	nucleus	36.87	42.51
KRH64126	Soybean	nucleus	31.04	41.6
KRH27807	Soybean	nucleus	38.66	41.57
KRH59494	Soybean	nucleus	25.67	41.25
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	29.1	41.23
KRH26151	Soybean	nucleus	44.93	41.18
KRH77684	Soybean	nucleus	38.96	41.17
KRH26282	Soybean	nucleus	43.13	40.76
KRH25594	Soybean	nucleus	40.75	39.28
KRH55951	Soybean	nucleus	40.15	38.65
KRH26956	Soybean	nucleus	39.55	38.07
KRH22379	Soybean	nucleus	39.4	37.55
KRH73489	Soybean	nucleus	28.51	37.02
KRG89779	Soybean	nucleus	28.51	36.73
KRH14656	Soybean	nucleus	28.21	36.63
KRH35103	Soybean	nucleus	32.84	36.48

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100784406	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EMBL:ACUP02002798	EnsemblPlantsGene:GLYMA_05G024400
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	UniProt:I1JZM1	InterPro:IPR000719	ProteinID:KRH56876.1
EnsemblPlants:KRH56877	ProteinID:KRH56877	ProteinID:KRH56877.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A564	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:2120766..2126331

Molecular Weight (calculated)

75297.1 Da

IEP (calculated)

9.452

GRAVY (calculated)

-0.614

Length

670 amino acids

Sequence
(BLAST)

001: MGCVVAKQAV SVTPAIEHSV ESEKNRKKKT ESVGASRSEL GESGRASSNG GSESLSFRLG NLSKYVEGEQ AAAGWPAWLS AVACEAIHGW VPLRADAFEK
101: LDKIGQGTYS SVFRAKEIQT GKIVALKKVR FDNFEPESVR FMAREIMILR RLDHPNIIKL EGLITSRLSC SIYLVFEYME HDITGLLARP EIKFSESQIK
201: CYMKQLLSGI EHCHSRGVMH RDIKGSNLLV NNEGILKVAD FGLANFSNSG NKQPLTSRVV TLWYRPPELL LGSTAYGASV DLWSVGCVFA ELLIGKPILQ
301: GRTEVEQLHK IFKLCGSPPE EYWKKTRLPH ATLFKPQQPY DSCLRETFKD FHASSVNLLQ TLLSVEPSKR GTASSALSLE YFKTKPYACD PSSLPIYPPS
401: KEIDAKNEEE SRRKKIGGRA CRAESRKPSR NPLALSKLAP AEDLSSQTQT SQKMDDRSVH IIKEENTNTC EEAPKQSSGK PEDASSYMKN ASQVDIPFPG
501: PLQVSKSSGF AWAKRRRDDT SVRSHSRSIS RGYIFNSSET STLNSRNNSE SRNHENKKFF GAHANSRGHD LLEISKLAMQ NQWSKFDRLD SFDTCDEYHS
601: QELSVALYNR QDSLSKRSNL SYQDQAEKVE FSGPLLSQMH TVDELLERHE SHIRRTVRRS WFQRGKKQGK

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.