CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93581	Soybean	plastid	92.67	92.83
KRH01235	Soybean	nucleus, plastid	67.29	58.69
KRH44946	Soybean	nucleus	66.61	57.67
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	56.56	50.53
AT5G39420.1	Thale cress	nucleus	54.86	50.0
PGSC0003DMT400003634	Potato	plastid	55.88	49.47
Bra028432.1-P	Field mustard	nucleus, plastid	54.51	49.16
CDY37004	Canola	nucleus	54.34	49.08
PGSC0003DMT400076796	Potato	nucleus	55.88	48.38
GSMUA_Achr6P24660_001	Banana	nucleus	53.15	47.85
KRH56877	Soybean	nucleus, plastid	54.0	47.31
KRH63286	Soybean	nucleus	54.17	47.18
KRH03527	Soybean	nucleus, plastid	54.51	47.13
VIT_14s0108g01270.t01	Wine grape	nucleus	56.39	46.49
KRH54601	Soybean	plastid	53.32	46.1
GSMUA_Achr2P13490_001	Banana	nucleus	51.11	46.08
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	51.62	45.63
KRH21021	Soybean	cytosol	41.91	45.56
KRH11268	Soybean	cytosol	41.91	45.47
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	50.94	45.17
CDX74463	Canola	nucleus	47.19	45.11
KRH50926	Soybean	nucleus	41.91	44.89
KRH02197	Soybean	nucleus	41.74	44.87
GSMUA_Achr4P03350_001	Banana	nucleus	50.77	44.68
AT3G01085.3	Thale cress	plastid	47.53	44.22
KRH41090	Soybean	cytosol	41.74	44.14
CDX74282	Canola	plastid	46.85	44.14
GSMUA_Achr4P28060_001	Banana	nucleus	50.6	44.13
Os07t0596600-02	Rice	plasma membrane	53.15	44.13
KRH59775	Soybean	nucleus	41.57	43.96
KRG96918	Soybean	cytosol	42.76	43.88
KRH54127	Soybean	mitochondrion	41.57	43.65
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	51.79	43.49
HORVU2Hr1G034440.3	Barley	plastid	51.45	43.45
CDY34698	Canola	plastid	46.51	43.4
CDY55799	Canola	plastid	46.34	43.38
OQU90194	Sorghum	plastid	52.3	43.36
TraesCS2D01G190600.1	Wheat	plastid	50.94	43.21
TraesCS2B01G209300.1	Wheat	plastid	50.94	43.21
TraesCS2A01G182800.1	Wheat	plastid	50.77	43.06
KRH63826	Soybean	cytosol	26.75	43.01
KRH68662	Soybean	nucleus	42.76	42.4
KRG92786	Soybean	nucleus	41.74	42.24
KRH34013	Soybean	nucleus	41.57	42.07
Zm00001d006759_P012	Maize	plastid	51.28	41.75
KRH53817	Soybean	nucleus	34.41	41.06
Zm00001d022041_P001	Maize	plastid	51.79	40.59
KRH64126	Soybean	nucleus	34.41	40.4
KRH59494	Soybean	nucleus	28.45	40.05
Bra041128.1-P	Field mustard	plastid	35.09	38.58
KRH06043	Soybean	nucleus	38.16	38.55
KRG91692	Soybean	endoplasmic reticulum, plasma membrane	30.66	38.05
KRH27807	Soybean	nucleus	39.69	37.4
KRH26282	Soybean	nucleus	44.97	37.24
KRH55283	Soybean	nucleus	44.8	37.04
KRH27243	Soybean	nucleus	44.63	37.01
KRH77684	Soybean	nucleus	39.86	36.91
KRH22087	Soybean	nucleus	43.95	36.24
KRH26151	Soybean	nucleus	44.12	35.43
KRG89779	Soybean	nucleus	30.66	34.62
KRH25594	Soybean	nucleus	40.89	34.53
KRH73489	Soybean	nucleus	30.32	34.5
KRH14656	Soybean	nucleus	30.32	34.5
CDX67429	Canola	cytosol, plastid	54.17	34.27
KRH55951	Soybean	nucleus	40.55	34.2
KRH35103	Soybean	nucleus	34.92	34.0
KRH26956	Soybean	nucleus	39.52	33.33
KRH22379	Soybean	nucleus	39.01	32.57
CDY37546	Canola	nucleus	47.87	26.86
CDX91965	Canola	nucleus	47.19	26.74
Bra001023.1-P	Field mustard	nucleus	47.7	26.32
Bra039147.1-P	Field mustard	nucleus	47.87	25.97
CDY43266	Canola	nucleus	44.46	24.46

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100787268	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	EMBL:ACUP02008072	EnsemblPlantsGene:GLYMA_13G060300
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719	UniProt:K7LXJ2	EnsemblPlants:KRH18441
ProteinID:KRH18441	ProteinID:KRH18441.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF327	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002955007	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:+:15759432..15765334

Molecular Weight (calculated)

65683.3 Da

IEP (calculated)

10.075

GRAVY (calculated)

-0.578

Length

587 amino acids

Sequence
(BLAST)

001: MGCISSKNAV ARTCSPSPAV LDIAEPNPAY AKGHSWLPVL ESKTGSEDER SNSKFRKNSS KKSSGSFSFR HVEAEQNAAG WPPWLIATAA EAIQGWIPLK
101: ADSFQKLEKI GEGTYSSVFR AREVETGKMF ALKKVRFDNF QPESIRFMAR EITILRRLDH PNIMKLEGII TSRLSNSIYL VFEYMEHDLA GLVSRPDIVF
201: SESQIKCYMR QLLSGLEHCH MRGIMHRDIK LSNILLNNEG VLKIGDFGLA NTISTNSKHH LTSRVVTLWY RPPELLMGST NYGVSVDLWS VGCVFAELFL
301: GKPILKGRTE VEQLHKIFKL CGSPPEEFWK KTKLPHATMF KPQTNYESSL RERCADFPAS AVNLLETLLS IDPGNRGTAS SALMSEYFST KPYACNASSL
401: PKYPPSKEMD AKSMGDSSRK KTGGKMREVA TSRRQQRRVS KILQDPNNFG KSISKEDTQN ISENARRDDG KAHLTKGKGG AMHKDYTKSH LDAMSETSQM
501: NVANGNGYSV GSNNTFTWVK RRKQDASSTL SDGSRSKISA LDPNFAKRTY DLTTLRVSMD LDPEELMNAQ GDRGRAVRKS RFGRDNR

Best Arabidopsis Sequence Match ( AT5G39420.1 )
(BLAST)

001: MGCISSKNVS CLTDQGDSPL PEPGLLSTSQ QHRVLIDHSL EASHNSKRSR KSRRLGGSDL RIGVSLGSSH RNIEAEQAAA GWPAWLCSAA AEAVHGWVPL
101: KAEAFQKLEK IGQGTYSSVF RAREVETGKM VALKKVKFDN LQPESIRFMA REILILRKLN HPNIMKLEGI VTSRASSSIY LVFEYMEHDL AGLSSNPDIR
201: FTEPQIKCYM KQLLWGLEHC HMRGVIHRDI KASNILVNNK GVLKLGDFGL ANVVTPSNKN QLTSRVVTLW YRAPELLMGS TSYGVSVDLW SVGCVFAEIL
301: MGKPILKGRT EIEQLHKIYK LCGSPQDSFW KRTKLPHATS FKPQHTYEAT LRERCKDLSA TGVYLLETLL SMEPDKRGTA SSALNSEYFL TRPYACDPSS
401: LPKYPPNKEM DAKYRDDMRR KRANLKLRDS GVGRKHKRPH RAEYDPKNYA KLPIRKDTLE VKNIPNEASR ATTTTHGNYY KVSDLPMTTG PASGFAWAVK
501: RRKDPDNIST LTYYQPSSKS QLSGTSVAFA KNTFGLNLKP DNDSVWEVQG NNYDDVIEEV PSHESKLSRI GERHGSLDGS GLDFSQREED SPKKTLEHLQ
601: FGKQSISGPL IFKSGKIDEI LQRNESNIRQ AVRKSHLQRE QDDR

Arabidopsis Description

cdc2cAtAt5g39420 [Source:UniProtKB/TrEMBL;Acc:B5X564]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.