Factsheet for Solyc03g115660.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063133	Potato	nucleus	98.41	97.98
VIT_17s0000g06650.t01	Wine grape	plastid	72.65	73.18
CDY71137	Canola	plastid	45.73	72.48
KRH56877	Soybean	nucleus, plastid	68.16	70.3
KRH63286	Soybean	nucleus	68.02	69.73
KRH54601	Soybean	plastid	68.02	69.22
KRH03527	Soybean	nucleus, plastid	67.87	69.07
GSMUA_Achr6P24660_001	Banana	nucleus	60.64	64.26
CDX83825	Canola	plastid	64.69	63.68
CDX73077	Canola	cytosol	58.47	63.22
AT1G18670.3	Thale cress	nucleus	65.85	63.19
Bra015920.1-P	Field mustard	cytosol	58.18	62.91
CDX96534	Canola	cytosol	58.03	62.75
AT1G74330.1	Thale cress	nucleus	63.1	62.37
CDX81891	Canola	plastid	62.37	61.75
GSMUA_Achr3P30270_001	Banana	nucleus, plastid	58.76	61.33
CDX96706	Canola	nucleus	64.54	60.19
Bra016547.1-P	Field mustard	nucleus	63.53	59.16
GSMUA_Achr2P13490_001	Banana	nucleus	55.14	58.53
GSMUA_Achr5P01580_001	Banana	nucleus, plastid	55.28	57.53
TraesCS2A01G182800.1	Wheat	plastid	57.45	57.37
HORVU2Hr1G034440.3	Barley	plastid	57.6	57.27
TraesCS2B01G209300.1	Wheat	plastid	57.31	57.23
TraesCS2D01G190600.1	Wheat	plastid	57.31	57.23
OQU90194	Sorghum	plastid	58.47	57.06
GSMUA_Achr4P28060_001	Banana	nucleus	55.43	56.91
Os07t0596600-02	Rice	plasma membrane	58.18	56.86
GSMUA_Achr4P03350_001	Banana	nucleus	54.27	56.22
Zm00001d006759_P012	Maize	plastid	58.61	56.17
GSMUA_Achr7P26440_001	Banana	cytosol, nucleus, plastid	56.73	56.08
Solyc02g088330.2.1	Tomato	cytosol, nucleus, plastid	52.39	55.1
Zm00001d022041_P001	Maize	plastid	57.31	52.87
Solyc01g067640.2.1	Tomato	nucleus	39.94	47.59
Solyc03g097690.2.1	Tomato	cytosol	38.49	46.58
Solyc01g098160.2.1	Tomato	nucleus	38.64	46.43
Solyc04g051460.2.1	Tomato	cytosol	30.97	45.34
Solyc11g045610.1.1	Tomato	nucleus	40.81	44.06
Solyc07g063130.2.1	Tomato	plastid	43.85	41.97
Solyc06g064660.2.1	Tomato	endoplasmic reticulum, plasma membrane	41.1	41.4
Solyc10g008280.2.1	Tomato	nucleus	40.23	40.88
Solyc01g103350.2.1	Tomato	nucleus	42.55	40.16
Solyc07g053910.2.1	Tomato	nucleus, plastid	41.39	39.94
Solyc04g071920.1.1	Tomato	nucleus	32.56	39.54
Solyc04g056280.2.1	Tomato	nucleus	25.62	34.57
Solyc06g073630.2.1	Tomato	nucleus	25.04	34.19

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0051726	InterPro:IPR000719	UniProt:K4BL68	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc03g115660.2	EnsemblPlants:Solyc03g115660.2.1	UniParc:UPI0002768B39
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:65300724..65306706

Molecular Weight (calculated)

76831.2 Da

IEP (calculated)

9.389

GRAVY (calculated)

-0.590

Length

691 amino acids

Sequence
(BLAST)

001: MGCVASKQTV SVTPAFDHSG ILVRDGEDVG SGRGRVGSGG FGLDFDLKKV KKRGDSGAGS ELDESGRASS NGCGSESVSF RLGNLQKYVE GEQVAAGWPA
101: WLSAVAGEAI QGWVPLRAES FEKLEKIGQG TYSSVFRARD LESGRTVALK KVRFDNFEPE SVRFMAREIM ILRRLDHPNI IKLEGLITSR LSCSMYLVFE
201: YMEHDISGLL SCPEVEFSES QIKCYMKQLL SGIEHCHSRG VMHRDIKGAN LLVNNDGILK VADFGLANFC NLGRKQPLTS RVVTLWYRPP ELLLGSTEYG
301: ASVDLWSVGC VFGELLTGKP ILQGRTEVEQ LHKIFKLCGS PPDDYWKKSK LPHATLFKPQ HPYESCLWDT FKDLTKSSVS LIETLLSVEP PKRGTASSAL
401: ASEYFKTKPH ACDPLSLPKY PPSKEIDAKH CEEAKRKKPS GRARGPETTR KSIRKQNATN KLAPEEKLPV QNQGVPKSNG SSLGTLKEGD IIIGLERPKP
501: SVDFRGEASH IKNASQGDVP FSGPLQVSGS SGFAWAKRRV DDSSMRSRSK SSSRSLKFEP SGAVHTKNNT ELKKQENYVA TNGSHTNSKG RDTYESTKHA
601: MQRHWSQLEQ TDSFDTSDGY HSQELSLALY LKEETAFKRI NVVQDQMDKV EFSGPLLSQS HRVEELLEKH ERQIRQAVRR SWFQRVRKNG N

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.