Factsheet for Zm00001d033847_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93534	Sorghum	cytosol	97.06	96.68
Zm00001d013371_P001	Maize	nucleus	97.06	93.75
Zm00001d012392_P001	Maize	cytosol	37.45	93.63
Os01t0958000-01	Rice	plasma membrane	94.12	93.57
TraesCS3A01G498200.1	Wheat	nucleus	91.37	91.91
TraesCSU01G058100.1	Wheat	nucleus	91.18	91.72
TraesCS3B01G561200.1	Wheat	nucleus	90.78	91.32
GSMUA_Achr5P05370_001	Banana	nucleus	87.65	86.63
HORVU3Hr1G110150.3	Barley	plastid	91.18	83.78
KRH73489	Soybean	nucleus	82.35	81.4
PGSC0003DMT400015241	Potato	nucleus	80.39	81.03
Solyc06g073630.2.1	Tomato	nucleus	80.39	81.03
KRG89779	Soybean	nucleus	82.55	80.96
KRH14656	Soybean	nucleus	81.76	80.81
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	56.86	62.37
Zm00001d032078_P002	Maize	cytosol	36.86	58.2
Zm00001d002645_P001	Maize	cytosol	24.31	52.1
Zm00001d047482_P001	Maize	nucleus	38.82	36.13
Zm00001d029143_P003	Maize	nucleus	38.24	35.65
Zm00001d040829_P003	Maize	plastid	38.63	35.37
Zm00001d007111_P001	Maize	plastid	38.82	34.55
Zm00001d022499_P001	Maize	plastid	37.84	33.8
Zm00001d042285_P001	Maize	endoplasmic reticulum	34.51	31.83
Zm00001d011967_P001	Maize	plastid	34.51	31.48
Zm00001d008874_P002	Maize	nucleus	40.2	29.41
Zm00001d039425_P003	Maize	nucleus	40.0	28.81
Zm00001d016846_P002	Maize	cytosol	39.02	28.23
Zm00001d023945_P003	Maize	mitochondrion	37.25	27.94
Zm00001d048994_P003	Maize	vacuole	35.69	27.49
Zm00001d006759_P012	Maize	plastid	37.45	26.49
Zm00001d035050_P002	Maize	nucleus	38.63	26.16
Zm00001d049698_P003	Maize	nucleus	38.82	25.75
Zm00001d022041_P001	Maize	plastid	37.45	25.5
Zm00001d000147_P006	Maize	nucleus, plastid	35.69	24.69
Zm00001d041514_P002	Maize	plastid	35.29	24.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100279243	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20
UniProt:B4F9F3	EMBL:BT033741	EMBL:BT037632	EMBL:BT042985	EMBL:BT085698	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM08770.1
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00017B60DC
EnsemblPlantsGene:Zm00001d033847	EnsemblPlants:Zm00001d033847_P003	EnsemblPlants:Zm00001d033847_T003	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:+:275685271..275689723

Molecular Weight (calculated)

56462.1 Da

IEP (calculated)

9.661

GRAVY (calculated)

-0.834

Length

510 amino acids

Sequence
(BLAST)

001: MAVAAPGQLN LDEAPSWGSR SVDCFEKLEQ IGEGTYGQVY MAKETGTNEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIKLKEI VTSPGPERDE
101: QGKPIDGNKY KGSIYMVFEY MDHDLTGLAD RPGMRFTVPQ IKCYMRQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNGNLTNR
201: VITLWYRPPE LLLGSTKYGP AVDMWSVGCI FAELLNGKPI LPGKNEPEQL TKIFELCGTP DDTIWPGVTK MPWYNNFKPP RPLKRRVKDF FKHFDRHALD
301: LLEKMLTLDP SQRISAKDAL DAEYFWTDPL PCDPKSLPKY EASHEFQTKK KRQQQRQAEE AAKRQKLNHP PPHSRLPPLQ QPGQAHPQMR PGQGMHNVPP
401: VAAGPGHHYA KPRGPGGPNR YPQGGNQGGG YNPNRGGQGG GYGSGPYPQQ GRGPPYPGAA GPRGSGGSGY GAGGPNYQQG GPYGTSGPGR GPNYSQGSGS
501: RNQQQYGNWQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.