Factsheet for Os01t0958000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033847_P003	Maize	nucleus	93.57	94.12
EER93534	Sorghum	cytosol	93.76	93.95
TraesCSU01G058100.1	Wheat	nucleus	91.03	92.11
TraesCS3B01G561200.1	Wheat	nucleus	90.84	91.91
TraesCS3A01G498200.1	Wheat	nucleus	90.84	91.91
Zm00001d013371_P001	Maize	nucleus	93.18	90.53
GSMUA_Achr5P05370_001	Banana	nucleus	89.47	88.95
Os05t0389700-01	Rice	nucleus	89.67	88.63
HORVU3Hr1G110150.3	Barley	plastid	91.23	84.32
KRG89779	Soybean	nucleus	83.43	82.31
PGSC0003DMT400015241	Potato	nucleus	80.51	81.62
KRH14656	Soybean	nucleus	81.87	81.4
KRH73489	Soybean	nucleus	81.68	81.2
Solyc06g073630.2.1	Tomato	nucleus	79.92	81.03
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	57.31	63.23
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	33.92	54.38
Os07t0668000-00	Rice	cytosol, plasma membrane	2.73	45.16
Os01t0367700-01	Rice	plasma membrane	39.57	36.38
Os01t0925700-01	Rice	cytosol	24.95	34.5
Os11t0242500-01	Rice	mitochondrion	34.31	30.4
Os02t0559300-02	Rice	plasma membrane	38.99	27.43
Os08t0112500-01	Rice	nucleus	38.79	26.6
Os07t0596600-02	Rice	plasma membrane	36.45	26.45
Os02t0304500-00	Rice	plastid	26.71	26.3
Os12t0577700-00	Rice	plasma membrane	33.33	23.11
Os01t0201000-01	Rice	plasma membrane	2.53	10.16

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	EMBL:AJ512410
EMBL:AJ564977	ProteinID:BAD88154.1	ProteinID:BAF07364.1	ProteinID:BAS76301.1	ncoils:Coil	ProteinID:EEE56036.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0008353
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os01g0958000	EnsemblPlants:Os01t0958000-01	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
UniProt:Q5JK68	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00004C2BB2	SEG:seg

Description

CYCLIN-DEPENDENT KINASE C;2Similar to Cell division control protein 2 homolog 2 (EC 2.7.1.37) (Fragment). (Os01t0958000-01);Similar to Cyclin-dependent kinase C-2. (Os01t0958000-02)

Coordinates

chr1:+:42229585..42232625

Molecular Weight (calculated)

56829.5 Da

IEP (calculated)

9.462

GRAVY (calculated)

-0.847

Length

513 amino acids

Sequence
(BLAST)

001: MAVAAPGQLN LDESPSWGSR SVDCFEKLEQ IGEGTYGQVY MAKETETNEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIQLKEI VTSPGPERDE
101: QGKPIEGNKY KGSIYMVFEY MDHDLTGLAD RPGMRFTVPQ IKCYMRQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNGNLTNR
201: VITLWYRPPE LLLGSTRYGP AVDMWSVGCI FAELLNGKPI LTGKNEPEQL SKIFELCGTP DELIWPGVTK MPWYNNFKPQ RPMKRRVKES FKHFDQHALD
301: LLEKMLTLDP SQRISAKDAL DAEYFWTDPL PCDPKSLPKY EASHEFQTKK KRQQQRQAEE AAKRQKLQHP PPHSRLPPIQ NPGQPHQIRP GQPMHNAPPV
401: AAGPSHHYAK PRGPGGPNRY PQGGNQGGYN PNRGGQGGGY GSGPYPQQGR GPPPYPGGGM GGAGGPRGGG GSGYGVGGPN YQQGGPYGAS GPGRGPNYNQ
501: GGSRNQQQYG NWQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.