Factsheet for TraesCS3B01G561200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G058100.1	Wheat	nucleus	99.41	99.41
TraesCS3A01G498200.1	Wheat	nucleus	99.21	99.21
Os01t0958000-01	Rice	plasma membrane	91.91	90.84
Zm00001d033847_P003	Maize	nucleus	91.32	90.78
HORVU3Hr1G110150.3	Barley	plastid	98.82	90.27
EER93534	Sorghum	cytosol	90.14	89.26
Zm00001d013371_P001	Maize	nucleus	89.74	86.17
TraesCS1B01G254800.1	Wheat	nucleus	86.78	86.11
GSMUA_Achr5P05370_001	Banana	nucleus	85.21	83.72
PGSC0003DMT400015241	Potato	nucleus	78.5	78.66
KRG89779	Soybean	nucleus	80.28	78.27
Solyc06g073630.2.1	Tomato	nucleus	77.51	77.67
KRH14656	Soybean	nucleus	78.7	77.33
KRH73489	Soybean	nucleus	78.5	77.13
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	55.62	60.65
TraesCS4B01G151800.1	Wheat	nucleus	37.08	34.31
TraesCS2B01G139000.1	Wheat	nucleus	37.48	33.27
TraesCS3B01G473100.1	Wheat	cytosol, plasma membrane, plastid	36.09	32.8
TraesCS3B01G158600.1	Wheat	cytosol	40.04	29.64
TraesCS6B01G231200.2	Wheat	cytosol	39.05	28.41
TraesCS7B01G345800.1	Wheat	nucleus	29.78	26.54
TraesCS2B01G209300.1	Wheat	plastid	35.9	26.3
TraesCS7B01G220500.1	Wheat	nucleus	38.26	26.11
TraesCS5B01G081500.1	Wheat	nucleus	34.52	25.85
TraesCS4B01G089100.3	Wheat	mitochondrion	34.52	25.4
TraesCS5B01G110400.1	Wheat	nucleus	14.79	23.36

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS3B01G561200	EnsemblPlants:TraesCS3B01G561200.1	TIGR:cd07840
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:794864567..794867372

Molecular Weight (calculated)

56088.6 Da

IEP (calculated)

9.477

GRAVY (calculated)

-0.774

Length

507 amino acids

Sequence
(BLAST)

001: MAVAAPGQLN LDEFPSWGSR GVDCFEKLEQ IGEGTYGQVY MAKETETNEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIQLKEI VTSPGPDRDE
101: QGKPIDGNKY KGSIYMVFEY MDHDLTGLAD RPGMRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNGNLTNR
201: VITLWYRPPE LLLGSTRYGP AVDMWSVGCI FAELLNGKPI LPGKNEPEQL TKIFELCGTP DELIWPGVTK MPWYNNFKPP RVLKRKVKDA FKHFDRHALD
301: LLERMLTLDP SQRIPAKEAL DAEYFWTDPL PCDPKSLPSY EASHEFQTKK KRQQQRQAEE AAKRQKINHP PPHSRLPPIQ HPGQSHQIRP GHAPPVAGGS
401: SHYAKPRGPG GPNRYPQGGN QGAGYNNPNR GGQGSGYGSA PYPQQGRGPP PFPAAGAPRG GAGSGYGVGG PNYPPGGPPY GTSGPGRGGP NYPQGGSRNQ
501: QQYGSWQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.