Factsheet for Zm00001d013371_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033847_P003	Maize	nucleus	93.75	97.06
EER93534	Sorghum	cytosol	93.18	96.09
Zm00001d012392_P001	Maize	cytosol	36.74	95.1
Os01t0958000-01	Rice	plasma membrane	90.53	93.18
TraesCS3A01G498200.1	Wheat	nucleus	86.74	90.34
TraesCSU01G058100.1	Wheat	nucleus	86.55	90.14
TraesCS3B01G561200.1	Wheat	nucleus	86.17	89.74
GSMUA_Achr5P05370_001	Banana	nucleus	84.47	86.43
HORVU3Hr1G110150.3	Barley	plastid	86.93	82.7
PGSC0003DMT400015241	Potato	nucleus	77.65	81.03
KRH73489	Soybean	nucleus	78.98	80.81
KRG89779	Soybean	nucleus	79.55	80.77
Solyc06g073630.2.1	Tomato	nucleus	77.27	80.63
KRH14656	Soybean	nucleus	78.41	80.23
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	55.11	62.58
Zm00001d032078_P002	Maize	cytosol	35.42	57.89
Zm00001d002645_P001	Maize	cytosol	22.92	50.84
Zm00001d047482_P001	Maize	nucleus	36.74	35.4
Zm00001d040829_P003	Maize	plastid	36.93	35.01
Zm00001d029143_P003	Maize	nucleus	36.17	34.92
Zm00001d007111_P001	Maize	plastid	36.55	33.68
Zm00001d022499_P001	Maize	plastid	35.8	33.1
Zm00001d042285_P001	Maize	endoplasmic reticulum	32.95	31.46
Zm00001d011967_P001	Maize	plastid	32.95	31.13
Zm00001d008874_P002	Maize	nucleus	38.45	29.12
Zm00001d039425_P003	Maize	nucleus	38.26	28.53
Zm00001d023945_P003	Maize	mitochondrion	35.61	27.65
Zm00001d016846_P002	Maize	cytosol	36.74	27.52
Zm00001d048994_P003	Maize	vacuole	34.09	27.19
Zm00001d006759_P012	Maize	plastid	35.98	26.35
Zm00001d035050_P002	Maize	nucleus	36.55	25.63
Zm00001d022041_P001	Maize	plastid	35.98	25.37
Zm00001d049698_P003	Maize	nucleus	36.74	25.23
Zm00001d000147_P006	Maize	nucleus, plastid	33.52	24.02
Zm00001d041514_P002	Maize	plastid	33.14	23.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	UniProt:A0A1D6GIH2
ProteinID:AQK63237.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000843296D
EnsemblPlantsGene:Zm00001d013371	EnsemblPlants:Zm00001d013371_P001	EnsemblPlants:Zm00001d013371_T001	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:-:9977224..9980416

Molecular Weight (calculated)

58228.4 Da

IEP (calculated)

9.480

GRAVY (calculated)

-0.755

Length

528 amino acids

Sequence
(BLAST)

001: MAVAVPGQLN LDEAPSWGSR SVDCFEKLEQ IGEGTYGQVY MAKETGTNEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIKLKEI VTSPGPERDE
101: QGRPIDGNKY KGSIYMVFEY MDHDLTGLAD RPGMRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS SDHNGNLTNR
201: VITLCCYRKV LIVFLDCGCR PPELLLGSTK YSPAVDMWSV GCIFAELLNG KPILPGKNEP EQLTKIFELC GTPDDTIWPG VTKMPWYNNF KPHRPLKRRV
301: KDFFKHFDRH ALDLLEKMLT LDPSQRISAK DALDAEYFWT DPLPCDPKSL PKYEASHEFQ TKKKRQQQRQ AEEAAKRQKL NHPPPHSRLP PIQQPGQAHP
401: QIRPGQGMHN VPPVAAGPGH HYTKPRGPGG PNRYPPGGNQ GGGYNPNRGG QGGGYGSGPY PQQGRGPPYP GGGMGGTAGP RGSGGSGYGA GGPNYQQGGP
501: YGASGPGRGS NYSQGGGSRN QQQYGNWQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.