Factsheet for Os05t0389700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0958000-01	Rice	plasma membrane	88.63	89.67
HORVU1Hr1G056380.1	Barley	nucleus	85.55	86.72
TraesCS1B01G254800.1	Wheat	nucleus	85.36	86.69
TraesCS1A01G243300.1	Wheat	nucleus	85.16	86.16
TraesCS1D01G243300.1	Wheat	nucleus	84.97	86.13
GSMUA_Achr5P05370_001	Banana	nucleus	85.55	86.05
EES18167	Sorghum	nucleus	84.59	85.08
KRG89779	Soybean	nucleus	80.35	80.19
KRH14656	Soybean	nucleus	79.0	79.46
PGSC0003DMT400015241	Potato	nucleus	77.26	79.25
Solyc06g073630.2.1	Tomato	nucleus	76.88	78.85
KRH73489	Soybean	nucleus	78.23	78.68
HORVU1Hr1G056390.2	Barley	plastid	75.92	77.1
VIT_00s0805g00020.t01	Wine grape	cytosol, mitochondrion, nucleus	54.34	60.65
Os08t0453800-00	Rice	endoplasmic reticulum, plasma membrane	32.95	53.44
Os07t0668000-00	Rice	cytosol, plasma membrane	2.5	41.94
Os01t0367700-01	Rice	plasma membrane	39.11	36.38
Os01t0925700-01	Rice	cytosol	24.66	34.5
Os11t0242500-01	Rice	mitochondrion	34.1	30.57
Os02t0559300-02	Rice	plasma membrane	38.73	27.57
Os02t0304500-00	Rice	plastid	26.98	26.87
Os08t0112500-01	Rice	nucleus	37.96	26.34
Os07t0596600-02	Rice	plasma membrane	35.07	25.74
Os12t0577700-00	Rice	plasma membrane	32.18	22.57
Os01t0201000-01	Rice	plasma membrane	1.93	7.81

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.3	MapMan:15.3.2.1.1	MapMan:18.4.3.1.3	Gene3D:3.30.200.20	EntrezGene:4338674
ProteinID:AAT47442.1	EMBL:AK073808	ProteinID:BAF17350.1	ProteinID:BAS93836.1	ProteinID:EEE63594.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004693	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0008353	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0051726	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os05g0389700	EnsemblPlants:Os05t0389700-01	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF187	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q6I5Y0
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00003B0D47	RefSeq:XP_015637332.1	SEG:seg

Description

CYCLIN-DEPENDENT KINASE C;1Similar to Cell division control protein 2 homolog 2 (EC 2.7.1.37) (Fragment). (Os05t0389700-01)

Coordinates

chr5:+:18868481..18872164

Molecular Weight (calculated)

57454.1 Da

IEP (calculated)

9.522

GRAVY (calculated)

-0.866

Length

519 amino acids

Sequence
(BLAST)

001: MAVAAPGQLN LDESPSWGSR SVDCFEKLEQ IGEGTYGQVY MARETETQEI VALKKIRMDN EREGFPITAI REIKILKKLH HQNVIQLKEI VTSPGPERDE
101: QGKPIHGNKY KGSIYMVFEY MDHDLTGLAD RPGMRFTVPQ IKCYMKQLLT GLHYCHINQV LHRDIKGSNL LIDNEGNLKL ADFGLARSFS NDHNGNLTNR
201: VITLWYRPPE LLLGSTKYGP AVDMWSVGCI FAELLNGKPI LPGKNEPEQL SKIFDVCGTP DESNWPGVTK MPWYNNFKPP RQLKRRVKEY FKHFDRLALD
301: LLEKMLTLDP AQRISAQDAL DAEYFWSDPL PCDPKSLPKY ESSHEFQTKK KRQQMRQADE AAKRQKTQHP QPHGRLPPIQ QTGQPHPQIR PGQPMNNPHA
401: PMAAGPGHHY AKPRGPGGSS RYPQGGNQGG GYPNRGGQGG GGSYGNAPYP QQGRGPPPPY PGSGMAGTGG PRGGVGGGYG GGSNYPQQGG PYGPSGPGRG
501: SNYPQQGGSR NQQQYGNWQ

Best Arabidopsis Sequence Match ( AT5G10270.1 )
(BLAST)

001: MAMASFGQLN LEEPPPIWGS RSVDCFEKLE QIGEGTYGQV YMAKEIKTGE IVALKKIRMD NEREGFPITA IREIKILKKL HHENVIQLKE IVTSPGRDRD
101: DQGKPDNNKY KGGIYMVFEY MDHDLTGLAD RPGLRFTVPQ IKCYMKQLLT GLHYCHVNQV LHRDIKGSNL LIDNEGNLKL ADFGLARSYS HDHTGNLTNR
201: VITLWYRPPE LLLGATKYGP AIDMWSVGCI FAELLHAKPI LPGKNEQEQL NKIFELCGSP DEKLWPGVSK MPWFNNFKPA RPLKRRVREF FRHFDRHALE
301: LLEKMLVLDP AQRISAKDAL DAEYFWTDPL PCDPKSLPTY ESSHEFQTKK KRQQQRQNEE AAKRQKLQHP PLQHSRLPPL QHGGQSHAAP HWPAGPNHPT
401: NNAPPQVPAG PSHNFYGKPR GPPGPNRYPP SGNQSGGYNQ SRGGYSSGSY PPQGRGAPYV AGPRGPSGGP YGVGPPNYTQ GGQYGGSGSS GRGQNQRNQQ
501: YGWQQ

Arabidopsis Description

CDKC-1CDKC [Source:UniProtKB/TrEMBL;Acc:A0A178UJP9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.