Factsheet for TraesCS5A01G075200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G081500.1	Wheat	nucleus	95.71	95.57
HORVU5Hr1G020060.7	Barley	nucleus	94.08	93.39
TraesCS5D01G088700.2	Wheat	nucleus, plastid	94.67	89.26
KXG23797	Sorghum	plastid	68.79	66.15
Zm00001d041514_P002	Maize	plastid	67.46	62.38
Zm00001d000147_P006	Maize	nucleus, plastid	67.6	62.01
Os12t0577700-00	Rice	plasma membrane	62.87	57.43
TraesCS4A01G142300.1	Wheat	nucleus	37.72	46.03
TraesCS2A01G182800.1	Wheat	plastid	46.45	45.38
TraesCS2A01G119300.1	Wheat	nucleus	37.72	45.05
TraesCS3A01G439200.1	Wheat	cytosol, plasma membrane, plastid	32.84	39.93
TraesCS3A01G313300.1	Wheat	cytosol	40.09	39.45
TraesCS4A01G227200.2	Wheat	mitochondrion	35.5	37.15
TraesCS5A01G110100.1	Wheat	endoplasmic reticulum, plasma membrane	35.21	36.56
TraesCS6A01G192900.2	Wheat	nucleus	37.43	35.14
TraesCS7A01G319500.1	Wheat	nucleus	38.46	34.99
TraesCS3A01G498200.1	Wheat	nucleus	25.59	34.12
TraesCS1A01G243300.1	Wheat	nucleus	25.89	34.11
TraesCS5A01G110200.1	Wheat	plastid	0.0	0.0
TraesCS7A01G319600.1	Wheat	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF228	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5A01G075200	EnsemblPlants:TraesCS5A01G075200.1	TIGR:cd07840	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:+:89977750..89980213

Molecular Weight (calculated)

73454.6 Da

IEP (calculated)

8.694

GRAVY (calculated)

-0.515

Length

676 amino acids

Sequence
(BLAST)

001: MGCAVSKGAS LGSPGYEVSS AASGYEVVSG SASASASATI WSRPVRLEAL DLGGDGEGDE DKGARGNAVG GTARPGNLHR YIESEQAAAG WPAWLSAVAA
101: EAVQGWVPLK AENFEKLEKI GQGTYSSVFR ARSLETGRLV ALKKVRFDSV EPESVRFMAR EIIVLRRLQG HPNVIGLHGL ITSRSSACIY LVFEYMEHDL
201: AGLASSPDLS FSEPQIKCYM RQLLAGLEHC HARGVMHRDI KCANLLVSSD GVLKVADFGL ANVFSTSPTQ QPLTSRVVTL WYRPPELLLG ATAYDPSVDL
301: WSAGCVFAEL HARRPVLQGR TEVEQIHKIF KLCGSPPDAY WRRAGMTSNA SVFRPQAPYE SRLAETFGSA MPDAAFRLLG ALLSVEPAAR GTASTALASD
401: YFSTEPYACE PSSLPKCAPN KEMDAKFRED SRRRNNAPPP AKRLSRAHKS MQDTSQRHHS HVHAEESLPL EADGGLRPEP ETVSNDAPQP EPPCTRQMPG
501: SCQEEEDAPA PAPTRLPDNL ALSGGPVQLA ASTGFAWAKK PRVPDAATTK RSAPRGPRST ITDGGDAASA RTTAGATTGP YEAEKQEMIK QWAQVAEAFT
601: SSEAYNSRST REPLDAKQLK TSKKHKGKMK RVDYSGPLLS EPRHVDELLQ SHEQRIRRAG RRRTWFHKGN KKEQQH

Best Arabidopsis Sequence Match ( AT1G18670.1 )
(BLAST)

001: MGCVNSKQTV SVTPAIDHSG VFRDNVCSGS GRIVVEDLPP VTETKLLSWW SKSGKKSSSK KSGSELGSDF GELSESGRAS SNCRSESVSF RLGNLSKYLE
101: AEQVAAGWPA WLSNVAGEAI HGWVPFRSDA FEKLEKIGQG TYSSVFRARE TETGRIVALK KVRFDNFEPE SVRFMAREIL ILRKLNHPNI IKLEGIVTSK
201: LSCSIHLVFE YMEHDLTGLL SSPDIDFTTP QIKCYMKQLL SGLDHCHARG VMHRDIKGSN LLVNNEGILK VADFGLANFC NASGNKQPLT SRVVTLWYRP
301: PELLLGATEY GASVDLWSVG CVFAELLIGK PVLQGRTEVE QLHKIFKLCG SPPEDYWKKS KLPHAMLFKP QQHYDGCLRE TLKLKGLSDA DINLIETLLS
401: IQPHKRGTAS TALVSQYFTS KPFACDPSSL PVYSPSKEID AKHREDTTRK KISGNGRRGT ESRKPTRKPP AFAKLAPAED VRHHSQKFQK RNGHSVHNSI
501: DSDSTLFEKM QKPSNHEKDE ASHVKNASQG DVPFSGPLQV SVSSGFAWAK RRKDDICVRS HNRSLSRGHI PNLLGPSPAF SENTDVDSKN NEKEKEEKHG
601: ERTDSQDREA YEMLKLSMLK KWRQLERPDS FGGSDEYHSQ ELSLELYQRE EKAAKLGHLG YEDNDEKIEF SGPLLSKSYG VDELLERHER QIRQLVRKSW
701: FQKGKKQGK

Arabidopsis Description

IBS1Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18670]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.