Factsheet for PGSC0003DMT400083223

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g064660.2.1	Tomato	endoplasmic reticulum, plasma membrane	95.92	89.07
Zm00001d002645_P001	Maize	cytosol	27.32	73.11
CDX94278	Canola	cytosol, mitochondrion, nucleus, plasma membrane	31.24	72.1
HORVU5Hr1G035950.2	Barley	cytosol	29.98	69.96
PGSC0003DMT400071458	Potato	nucleus	62.48	61.8
CDX99520	Canola	nucleus	54.95	57.0
CDX86879	Canola	nucleus	54.79	56.56
CDY48795	Canola	nucleus	45.53	56.53
Bra037899.1-P	Field mustard	nucleus	54.63	56.4
AT1G33770.1	Thale cress	nucleus	54.0	56.03
PGSC0003DMT400073963	Potato	cytosol	23.39	55.81
VIT_18s0001g06780.t01	Wine grape	nucleus	58.08	55.56
AT4G10010.2	Thale cress	nucleus	56.51	55.47
Bra010213.1-P	Field mustard	nucleus	52.9	53.83
CDY70577	Canola	nucleus	52.9	53.83
Bra028011.1-P	Field mustard	nucleus	52.75	53.76
CDX93753	Canola	nucleus	52.59	53.69
CDY15287	Canola	nucleus	51.96	53.56
CDY70545	Canola	nucleus	52.59	53.51
CDX68307	Canola	plastid	51.49	53.16
Bra003921.1-P	Field mustard	plastid	51.81	53.05
CDY36688	Canola	plastid	51.02	52.67
CDX96330	Canola	plastid	52.28	52.36
CDX72813	Canola	plastid	52.28	52.36
Bra016132.1-P	Field mustard	plastid	52.28	52.36
OQU83167	Sorghum	cytosol, mitochondrion, nucleus	36.89	52.34
GSMUA_Achr6P07440_001	Banana	cytosol	51.18	52.24
GSMUA_Achr10P...	Banana	cytosol	40.5	51.91
AT1G71530.1	Thale cress	plastid	52.75	51.3
Bra007973.1-P	Field mustard	nucleus, plastid	51.96	51.24
CDY03697	Canola	nucleus, plastid	52.12	51.16
CDY67268	Canola	nucleus, plastid	51.49	50.46
KRH77684	Soybean	nucleus	49.92	50.16
GSMUA_Achr6P28920_001	Banana	plastid	52.28	50.15
EES15821	Sorghum	mitochondrion	50.55	49.85
KRH27807	Soybean	nucleus	48.51	49.6
PGSC0003DMT400027661	Potato	nucleus	45.68	49.49
PGSC0003DMT400057839	Potato	cytosol	44.74	49.48
TraesCS5A01G110100.1	Wheat	endoplasmic reticulum, plasma membrane	50.08	49.0
GSMUA_Achr2P05620_001	Banana	cytosol	51.33	48.59
TraesCS5D01G118300.1	Wheat	endoplasmic reticulum, plasma membrane	49.29	48.23
PGSC0003DMT400050723	Potato	cytosol	34.54	47.72
EES05258	Sorghum	nucleus	51.81	47.48
GSMUA_Achr5P16890_001	Banana	nucleus	51.49	47.47
TraesCS6D01G184000.1	Wheat	cytosol, nucleus, peroxisome	51.33	47.12
Zm00001d023945_P003	Maize	mitochondrion	50.24	47.06
PGSC0003DMT400011092	Potato	cytosol	41.6	46.74
GSMUA_Achr8P08480_001	Banana	nucleus	48.35	46.6
TraesCS6B01G231200.2	Wheat	cytosol	50.71	46.34
HORVU6Hr1G046160.12	Barley	nucleus	50.86	46.29
Zm00001d016846_P002	Maize	cytosol	51.18	46.24
PGSC0003DMT400032406	Potato	nucleus	52.43	46.07
PGSC0003DMT400064016	Potato	nucleus	51.65	45.13
TraesCS4D01G086800.1	Wheat	mitochondrion	44.74	45.02
TraesCS5B01G110400.1	Wheat	nucleus	22.61	44.86
Os08t0112500-01	Rice	nucleus	52.59	44.79
PGSC0003DMT400073941	Potato	cytosol	39.72	44.7
TraesCS6A01G192900.2	Wheat	nucleus	50.39	44.58
Os02t0559300-02	Rice	plasma membrane	50.86	44.44
HORVU4Hr1G015320.4	Barley	mitochondrion	45.05	44.43
Os11t0242500-01	Rice	mitochondrion	40.35	44.39
TraesCS4A01G227200.2	Wheat	mitochondrion	44.9	44.27
TraesCS7D01G316100.1	Wheat	nucleus	51.33	44.01
TraesCS7B01G220500.1	Wheat	nucleus	51.33	44.01
PGSC0003DMT400034197	Potato	nucleus	46.47	43.92
HORVU7Hr1G076360.30	Barley	nucleus	51.18	43.88
TraesCS7A01G319500.1	Wheat	nucleus	51.18	43.88
KXG24243	Sorghum	nucleus	51.65	43.69
Zm00001d035050_P002	Maize	nucleus	51.33	43.43
PGSC0003DMT400040754	Potato	cytosol	36.26	42.94
PGSC0003DMT400047231	Potato	nucleus	48.19	42.82
Zm00001d049698_P003	Maize	nucleus	51.49	42.65
TraesCS4B01G089100.3	Wheat	mitochondrion	45.21	41.8
PGSC0003DMT400063133	Potato	nucleus	43.64	40.06
Zm00001d048994_P003	Maize	vacuole	41.6	40.03
PGSC0003DMT400003634	Potato	plastid	40.82	39.22
PGSC0003DMT400076796	Potato	nucleus	40.66	38.2
PGSC0003DMT400015241	Potato	nucleus	29.67	37.35
PGSC0003DMT400073927	Potato	cytosol, nucleus, peroxisome	37.99	37.23
PGSC0003DMT400064516	Potato	mitochondrion, nucleus	33.59	36.96
GSMUA_Achr6P17460_001	Banana	cytosol	54.0	36.56
GSMUA_Achr9P08070_001	Banana	nucleus	52.28	35.13
PGSC0003DMT400004748	Potato	nucleus	2.98	12.58
TraesCS7A01G319600.1	Wheat	cytosol	0.0	0.0
TraesCS5D01G118400.1	Wheat	plastid	0.0	0.0
TraesCS5A01G110200.1	Wheat	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102591701	MapMan:18.4.3.1.8	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D6Q6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400033129
PGSC:PGSC0003DMG400033129	EnsemblPlants:PGSC0003DMT400083223	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056
PANTHER:PTHR24056:SF213	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295B3EC	RefSeq:XP_006356565.1	SEG:seg	:	:	:

Description

Cell division protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400033129]

Coordinates

chr6:-:47591617..47597064

Molecular Weight (calculated)

71084.7 Da

IEP (calculated)

9.440

GRAVY (calculated)

-0.609

Length

637 amino acids

Sequence
(BLAST)

001: MGCICSKGSS TDHDDVVEHA KEKEIQVDKS SVQLVAPSVR EEIKEIVKPN VTSEDNGVTT KVDDNEKTRI RERPKDGRFK RQSTMDFGLI RSRSRVVNMP
101: HGAIGVLCAA GWPLWLSSVA QEAIQGWVPR SAESFEKLNK IGQGTYSNVY KARDLETDKI VAMKKVKFVN MDPESVRFMA REICILRRLD HPNVMKLEAL
201: VTSRISGSIY LVFEYMEHDL AGLSSAPGIK FTEPQIKCYM QQMLLGLEHC HSRGILHRDI KGSNLLIGDN GVLKIGDFGL ATSFKSNQKQ PLTSRVVTLW
301: YRAPELLLGA TEYGVAIDMW SAGCILAELF NGKPIMPGRT EVEQMHKIFK LCGSPSEEYW SKSKLPLATS FKQQNPYKRG IADTFKDLPP TALALVDTLL
401: SIEPENRGTA SCALNSEFFK ANPLPCDPYS LPKYPPSKEY DTKVRHQEAR RRKAEAGKGH GAETTKKSSG QAKEELATEF NAHGQGQTSK SIRVKYNALE
501: DNRAGFSIEP PALRYGLTHS NSVIHPNTSG YTWTNKAKED SSAINERAYP ASQHGVEFSR QGSHKPRAAG EFSSIRSRRD DRSSGGDSTV YVPKRSRLLH
601: SGPLMPQGGS MEDMLKEHER QIQEAVRKAR QDKTRPE

Best Arabidopsis Sequence Match ( AT4G10010.2 )
(BLAST)

001: MGCICSKGTA EEEVSDQHEK PKENWNKTSS VQLIAPVTSK KDEFSHKSVD GSSGGRKADG LAHKPSARAS GLIVPVDDSD GKTVIVERPT RCHRRWPTAD
101: IGTGGGGFNI FPPSNIPTSV PHSPEAELIA AGWPSWLTSV AGEAIKGWVP RRAESFEKLD KIGQGTYSSV YRARDLETGK MVAMKKVRFV NMDPESVRFM
201: AREINILRKL DHPNVMKLEC LVTSKLSGSL YLVFEYMEHD LSGLALRPGV KFTESQIKCY MKQLLSGLEH CHSRGILHRD IKGPNLLVNN DGVLKIGDFG
301: LANIYHPEQD QPLTSRVVTL WYRAPELLLG ATEYGPGIDL WSVGCILTEL FLGKPIMPGR TEVEQMHKIF KFCGSPSDDY WQKTKLPLAT SFKPQQPYKR
401: VLLETFKNLP PSALALVDKL LSLEPAKRGT ASSTLSSKFF TMEPLPCNVS SLPKYPPSKE LDAKVRDEEA RRKKSETVKG RGPESVRRGS RDFKSTATTP
501: EFVASGQSKD TITTKRFNPQ EDSRTGLRGD RDQKGFSHTN SMIHPSITAT WSKNESCRNN VVELKATRSS NVPMTGRYLS PSHKEDVAVQ TTTTYVRKKN
601: RMHCSGPLMP PGGNIEDILK DHERQIQEAV RKSRLEKSAT RKNNKTCVK

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9T0F9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.