Factsheet for Os05t0510100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os03t0319300-01
Os05t0491000-01
Os05t0491100-01
Os07t0687200-02
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	Os01t0267900-01	AT2G41090.1	17360592
AT1G80120.1	Os01t0279300-01	AT2G41090.1	17360592
AT1G80120.1	Os01t0810300-01	AT2G41090.1	17360592
AT1G80120.1	Os03t0319300-01	AT2G41090.1	17360592
AT1G80120.1	Os05t0491000-01	AT2G41090.1	17360592
AT1G80120.1	Os05t0491100-01	AT2G41090.1	17360592
AT1G80120.1	Os07t0687200-02	AT2G41090.1	17360592
AT1G80120.1	Os12t0603800-00	AT2G41090.1	17360592
AT1G80120.1	Os01t0267900-01	AT5G21274.1	17360592
AT1G80120.1	Os01t0279300-01	AT5G21274.1	17360592
AT1G80120.1	Os01t0810300-01	AT5G21274.1	17360592
AT1G80120.1	Os03t0319300-01	AT5G21274.1	17360592
AT1G80120.1	Os05t0491000-01	AT5G21274.1	17360592
AT1G80120.1	Os05t0491100-01	AT5G21274.1	17360592
AT1G80120.1	Os07t0687200-02	AT5G21274.1	17360592
AT1G80120.1	Os12t0603800-00	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18481	Sorghum	cytosol	82.7	81.33
Zm00001d000310_P001	Maize	cytosol	82.7	80.33
HORVU1Hr1G077760.1	Barley	cytosol	75.95	78.26
TraesCS1B01G341900.1	Wheat	cytosol	77.22	77.87
TraesCS1D01G330600.1	Wheat	cytosol	77.22	77.54
TraesCS1A01G328100.1	Wheat	cytosol	77.64	75.72
Os01t0771000-01	Rice	cytosol	63.29	66.08
GSMUA_Achr3P13680_001	Banana	cytosol	29.54	53.44
PGSC0003DMT400001705	Potato	cytosol	42.62	47.87
Solyc03g116710.2.1	Tomato	cytosol	41.77	46.92
VIT_09s0002g06920.t01	Wine grape	cytosol	40.51	46.38
AT1G80120.1	Thale cress	cytosol	40.08	45.24
CDY37567	Canola	cytosol	39.66	44.76
CDY41119	Canola	cytosol	39.66	44.76
Bra008497.1-P	Field mustard	cytosol	39.66	44.76
KRH44464	Soybean	cytosol	40.08	43.38
KRH47444	Soybean	cytosol	39.66	42.92
KRH09722	Soybean	cytosol	39.66	42.92
CDY58464	Canola	cytosol	38.4	42.72
Bra001606.1-P	Field mustard	cytosol	37.97	42.25
CDY30113	Canola	cytosol	38.82	42.01
KRH23583	Soybean	cytosol	38.82	41.82
CDX75845	Canola	cytosol	37.55	41.78
Bra027206.1-P	Field mustard	cytosol	37.97	41.1
AT3G15810.1	Thale cress	cytosol	37.55	40.45
CDX87294	Canola	cytosol	40.08	36.97
Bra035195.1-P	Field mustard	cytosol	32.07	36.19
Os11t0120300-01	Rice	cytosol	27.85	29.86
Os12t0120100-01	Rice	cytosol	27.85	29.73
Os05t0311500-01	Rice	cytosol	25.32	27.91
Os01t0817650-00	Rice	cytosol, extracellular, plastid	24.89	27.7
Os12t0120500-01	Rice	plastid	25.32	26.32
Os11t0121000-00	Rice	plastid	25.32	26.2
Os05t0484800-01	Rice	plastid	22.78	23.08
Os07t0672600-00	Rice	plastid	20.68	21.4
Os01t0931600-00	Rice	cytosol	19.41	21.3
Os01t0931700-00	Rice	plastid	7.59	10.98

Protein Annotations

EnsemblPlants:Os05t0510100-01	EnsemblPlantsGene:Os05g0510100	EntrezGene:4339277	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF8	PFAM:PF04525
ProteinID:AAT44132.1	ProteinID:AAT44277.1	ProteinID:BAF17920.1	ProteinID:BAS94830.1	ProteinID:EEE64316.1	RefSeq:XP_015637461.1
SEG:seg	SUPFAM:SSF54518	UniParc:UPI00003A9247	UniProt:Q6L4V8	MapMan:35.1	:

Description

Protein of unknown function DUF567 family protein. (Os05t0510100-01)

Coordinates

chr5:+:25266272..25267148

Molecular Weight (calculated)

24770.5 Da

IEP (calculated)

4.791

GRAVY (calculated)

-0.002

Length

237 amino acids

Sequence
(BLAST)

001: MAQQQRMVIV GEEHCGGGED RELTVRKTTL FCPGDGLEAY DHGTGTLAFR VETYGRGGVC GGGAAAGDLA LLGPEGEPVL TVRRRRPSLH HRWDGFLGDG
101: AASGQKPLFS ARRSSILGVG SGAAAVLVDL LAPGAAGEFR VDGSFPRRCC RVVAVKAAAP AGGGGEEEEE EVVVAEVRRK VDEDAHVVMG RDVFVLWLRA
201: GFDAAFAMGI VLVLDRITGD ELNGDLSEDL AVASSPV

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.