Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d000310_P001 | Maize | cytosol | 92.95 | 91.8 |
| Os05t0510100-01 | Rice | cytosol | 81.33 | 82.7 |
| HORVU1Hr1G077760.1 | Barley | cytosol | 74.69 | 78.26 |
| TraesCS1B01G341900.1 | Wheat | cytosol | 74.69 | 76.6 |
| TraesCS1D01G330600.1 | Wheat | cytosol | 74.69 | 76.27 |
| TraesCS1A01G328100.1 | Wheat | cytosol | 75.1 | 74.49 |
| EES03690 | Sorghum | cytosol | 58.92 | 63.68 |
| GSMUA_Achr3P13680_001 | Banana | cytosol | 28.63 | 52.67 |
| PGSC0003DMT400001705 | Potato | cytosol | 41.49 | 47.39 |
| VIT_09s0002g06920.t01 | Wine grape | cytosol | 40.25 | 46.86 |
| Solyc03g116710.2.1 | Tomato | cytosol | 40.66 | 46.45 |
| AT1G80120.1 | Thale cress | cytosol | 39.0 | 44.76 |
| CDY37567 | Canola | cytosol | 38.59 | 44.29 |
| Bra008497.1-P | Field mustard | cytosol | 38.59 | 44.29 |
| CDY41119 | Canola | cytosol | 38.59 | 44.29 |
| KRH44464 | Soybean | cytosol | 39.42 | 43.38 |
| KRH09722 | Soybean | cytosol | 39.42 | 43.38 |
| CDY58464 | Canola | cytosol | 38.17 | 43.19 |
| CDY30113 | Canola | cytosol | 39.0 | 42.92 |
| Bra001606.1-P | Field mustard | cytosol | 37.76 | 42.72 |
| KRH47444 | Soybean | cytosol | 38.59 | 42.47 |
| CDX75845 | Canola | cytosol | 37.34 | 42.25 |
| Bra027206.1-P | Field mustard | cytosol | 38.17 | 42.01 |
| KRH23583 | Soybean | cytosol | 37.76 | 41.36 |
| AT3G15810.1 | Thale cress | cytosol | 37.76 | 41.36 |
| CDX87294 | Canola | cytosol | 38.17 | 35.8 |
| Bra035195.1-P | Field mustard | cytosol | 30.71 | 35.24 |
| EES15617 | Sorghum | cytosol | 29.88 | 31.3 |
| EES16590 | Sorghum | cytosol | 29.05 | 31.11 |
| EES09153 | Sorghum | cytosol | 28.22 | 29.18 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 28.63 | 28.75 |
| EES01655 | Sorghum | cytosol | 24.48 | 28.23 |
| EES09152 | Sorghum | plastid | 26.97 | 26.0 |
| EES19708 | Sorghum | plastid | 24.07 | 25.89 |
| EER99890 | Sorghum | plastid | 20.75 | 24.63 |
| EES09156 | Sorghum | plastid | 25.73 | 24.41 |
| EES04157 | Sorghum | plastid | 19.92 | 23.88 |
| EES02017 | Sorghum | cytosol, mitochondrion, plastid | 20.33 | 22.27 |
| EES09154 | Sorghum | plastid | 26.14 | 22.03 |
| EES04156 | Sorghum | plastid | 18.26 | 20.47 |
| EES15616 | Sorghum | plastid | 25.73 | 19.87 |
| EES04155 | Sorghum | cytosol | 17.84 | 19.72 |
| KXG39402 | Sorghum | mitochondrion | 20.75 | 19.38 |
Protein Annotations
| EnsemblPlants:EES18481 | EnsemblPlantsGene:SORBI_3009G192100 | EntrezGene:8067487 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 |
| InterPro:LOR | InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF8 | PFAM:PF04525 |
| ProteinID:EES18481 | ProteinID:EES18481.1 | RefSeq:XP_002440051.1 | SEG:seg | SUPFAM:SSF54518 | unigene:Sbi.20417 |
| UniParc:UPI0001A88B5E | UniProt:C5Z0T7 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:54402362..54403149
Molecular Weight (calculated)
25717.3 Da
IEP (calculated)
4.617
GRAVY (calculated)
-0.201
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPQQQQRVA IVGEEYCEGE DRELTVRKTT LFTPGDGLEA YDHRNGALAF RVETYGRGGA CGGGAARGDL ALLGARGEPV LTVRRRRPSL HNRWDGFLGD
101: GAAQGQKPVF SARRSSILGA GTGAAAVLVD LLAPVAGEFR VDGSFPRRCC RVVASAKAWA AGDGKGEEEE AEEDVVVAEV RRKVDEDAHV MMGRDVFVLW
201: VRAGFDAAFA MGIVLVLDRI TEDDVDGDLG EELLEAATSP A
101: GAAQGQKPVF SARRSSILGA GTGAAAVLVD LLAPVAGEFR VDGSFPRRCC RVVASAKAWA AGDGKGEEEE AEEDVVVAEV RRKVDEDAHV MMGRDVFVLW
201: VRAGFDAAFA MGIVLVLDRI TEDDVDGDLG EELLEAATSP A
001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
Arabidopsis Description
Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.