CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038514_P001	Maize	plastid	89.29	88.5
Zm00001d010627_P001	Maize	cytosol, plastid	81.7	80.97
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	73.21	78.85
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	71.43	77.67
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	71.88	77.4
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	71.88	77.03
Os05t0484800-01	Rice	plastid	76.34	73.08
EES01655	Sorghum	cytosol	60.27	64.59
GSMUA_Achr11P...	Banana	cytosol	48.21	54.55
GSMUA_Achr7P21880_001	Banana	cytosol	47.77	52.97
GSMUA_Achr10P...	Banana	plastid	47.77	51.2
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	47.32	50.96
EES16590	Sorghum	cytosol	49.11	48.89
VIT_08s0032g00760.t01	Wine grape	cytosol	42.86	48.0
EES16588	Sorghum	cytosol, nucleus, plastid	50.0	46.67
EES15617	Sorghum	cytosol	47.77	46.52
EES09153	Sorghum	cytosol	48.21	46.35
GSMUA_Achr11P...	Banana	cytosol	47.77	45.53
VIT_08s0056g00180.t01	Wine grape	cytosol	43.75	45.37
CDY62436	Canola	cytosol	37.5	42.86
CDY07715	Canola	cytosol	37.05	42.35
AT2G38640.1	Thale cress	cytosol	37.05	42.35
CDY62435	Canola	cytosol	36.61	42.05
CDY07714	Canola	cytosol	36.61	42.05
CDX91482	Canola	cytosol	36.61	42.05
Bra005092.1-P	Field mustard	cytosol	36.16	41.54
KRH09578	Soybean	cytosol	38.39	41.35
Bra000079.1-P	Field mustard	cytosol	36.16	41.33
Bra017111.1-P	Field mustard	cytosol	36.16	41.33
CDY18377	Canola	cytosol	36.16	41.33
Bra000080.1-P	Field mustard	cytosol	35.71	41.03
CDY60759	Canola	cytosol	35.71	41.03
CDX93313	Canola	cytosol	35.71	40.82
EES09152	Sorghum	plastid	45.09	40.4
EES04157	Sorghum	plastid	25.89	28.86
EER99890	Sorghum	plastid	25.89	28.57
EES03690	Sorghum	cytosol	26.34	26.46
EES09156	Sorghum	plastid	29.02	25.59
EES04156	Sorghum	plastid	24.11	25.12
EES18481	Sorghum	cytosol	25.89	24.07
EES09154	Sorghum	plastid	30.36	23.78
EES04155	Sorghum	cytosol	22.77	23.39
KXG39402	Sorghum	mitochondrion	26.79	23.26
EES02017	Sorghum	cytosol, mitochondrion, plastid	22.77	23.18
EES15616	Sorghum	plastid	30.36	21.79

Protein Annotations

EnsemblPlants:EES19708	EnsemblPlantsGene:SORBI_3009G176800	EntrezGene:8077018	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF21	PFAM:PF04525
ProteinID:EES19708	ProteinID:EES19708.1	RefSeq:XP_002441278.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0001A88EEC
UniProt:C5YZV5	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:53164853..53165527

Molecular Weight (calculated)

23936.1 Da

IEP (calculated)

10.313

GRAVY (calculated)

-0.002

Length

224 amino acids

Sequence
(BLAST)

001: MTAKVHPNVA VPPSLGQPPA VAPAPAPVTL TVWRKSLLFN GRGFTVFDAR GDLVYRVDSY ASDSRAEVVL MDAAGCPVLT LRRRKLIGLG LGSDQWLVYP
101: GEETRRLPPL YAVKRAAPQY MRGGFGGGAK SMAHVAACSG GGAAAKTTGA GGYEVEGSYL RRRCTVYDER RRAVAEVRPK EAVVGSDVFR LVVQPGMEVS
201: LAMAVVLALD QMFGKPSLLR SWSS

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.