CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15617	Sorghum	cytosol	88.89	86.96
Zm00001d044671_P001	Maize	cytosol	76.44	78.9
Os11t0120300-01	Rice	cytosol	62.22	63.35
TraesCS5D01G147200.1	Wheat	cytosol	63.56	62.72
Os12t0120100-01	Rice	cytosol	61.78	62.61
TraesCS5A01G145200.1	Wheat	cytosol	63.56	62.17
TraesCS5B01G144000.1	Wheat	cytosol	62.67	61.84
HORVU5Hr1G046200.1	Barley	cytosol	62.22	60.09
EES09153	Sorghum	cytosol	61.33	59.23
EES16588	Sorghum	cytosol, nucleus, plastid	62.67	58.75
HORVU4Hr1G024080.1	Barley	cytosol	62.22	57.38
TraesCS4D01G121500.1	Wheat	cytosol	62.22	57.38
TraesCS4B01G123400.1	Wheat	cytosol	62.22	57.38
TraesCS4A01G192000.1	Wheat	cytosol	61.78	56.97
EES01655	Sorghum	cytosol	48.0	51.67
EES09152	Sorghum	plastid	57.33	51.6
GSMUA_Achr11P...	Banana	cytosol	45.33	51.52
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	47.11	50.96
GSMUA_Achr7P21880_001	Banana	cytosol	44.44	49.51
GSMUA_Achr10P...	Banana	plastid	45.78	49.28
EES19708	Sorghum	plastid	48.89	49.11
VIT_08s0032g00760.t01	Wine grape	cytosol	43.56	49.0
VIT_08s0056g00180.t01	Wine grape	cytosol	44.0	45.83
AT2G38640.1	Thale cress	cytosol	38.22	43.88
CDY62436	Canola	cytosol	37.78	43.37
CDY07715	Canola	cytosol	37.78	43.37
CDY62435	Canola	cytosol	37.33	43.08
CDY07714	Canola	cytosol	37.33	43.08
Bra000079.1-P	Field mustard	cytosol	37.33	42.86
Bra017111.1-P	Field mustard	cytosol	37.33	42.86
KRH09578	Soybean	cytosol	39.56	42.79
CDX91482	Canola	cytosol	36.89	42.56
CDX93313	Canola	cytosol	36.89	42.35
CDY18377	Canola	cytosol	36.89	42.35
GSMUA_Achr11P...	Banana	cytosol	44.0	42.13
Bra000080.1-P	Field mustard	cytosol	36.44	42.05
Bra005092.1-P	Field mustard	cytosol	36.44	42.05
CDY60759	Canola	cytosol	35.11	40.51
EES03690	Sorghum	cytosol	31.11	31.39
EES04157	Sorghum	plastid	28.0	31.34
EES18481	Sorghum	cytosol	31.11	29.05
EES04156	Sorghum	plastid	27.56	28.84
EES09156	Sorghum	plastid	31.11	27.56
EER99890	Sorghum	plastid	23.56	26.11
EES09154	Sorghum	plastid	32.89	25.87
EES04155	Sorghum	cytosol	24.44	25.23
EES15616	Sorghum	plastid	33.78	24.36
EES02017	Sorghum	cytosol, mitochondrion, plastid	23.56	24.09
KXG39402	Sorghum	mitochondrion	26.67	23.26

Protein Annotations

EnsemblPlants:EES16590	EnsemblPlantsGene:SORBI_3008G025500	EntrezGene:8067160	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF5	PFAM:PF04525
ProteinID:AAO16698.1	ProteinID:EES16590	ProteinID:EES16590.1	RefSeq:XP_002442752.1	SEG:seg	SUPFAM:SSF54518
unigene:Sbi.20315	UniParc:UPI0000004F15	UniProt:Q84YE3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr8:-:2286229..2287790

Molecular Weight (calculated)

23893.8 Da

IEP (calculated)

10.145

GRAVY (calculated)

0.083

Length

225 amino acids

Sequence
(BLAST)

001: MAKVHPNAAA VATELATATT RAAADQQPEP PTTVLTVWRK SLLFNCDGFT VYDANGDLAF RVDCYARRHA EVVLMDAAGA PLLTVRRKRL SLAERWLVYD
101: GDAAASTTRP PLLSVRRHVG GLRVRGASSG KTMAHVVAAA SSSAAGGGEA FVVEGSYGRR ACAVRDARGD VVAEVRRKEA VGDDVFRLVV SPRFGVPLAM
201: GIVIALDEMF VAGRGSARSW LRIGC

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.