Factsheet for GSMUA_Achr11P19920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	63.4	75.25
GSMUA_Achr7P21880_001	Banana	cytosol	58.72	68.32
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	58.72	66.35
GSMUA_Achr10P...	Banana	plastid	57.87	65.07
GSMUA_Achr6P32380_001	Banana	cytosol	53.19	63.78
VIT_08s0032g00760.t01	Wine grape	cytosol	50.21	59.0
GSMUA_Achr3P09620_001	Banana	nucleus	52.77	58.22
GSMUA_Achr5P07550_001	Banana	cytosol	51.06	56.34
VIT_08s0056g00180.t01	Wine grape	cytosol	51.49	56.02
GSMUA_Achr6P15880_001	Banana	plastid	48.09	55.66
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	45.96	52.43
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	46.38	52.4
TraesCS3D01G334200.1	Wheat	cytosol	45.11	52.22
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	44.68	51.98
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	45.53	51.94
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	45.96	51.92
CDY07714	Canola	cytosol	42.98	51.79
CDY62435	Canola	cytosol	42.98	51.79
Bra000080.1-P	Field mustard	cytosol	42.98	51.79
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	45.96	51.67
CDY62436	Canola	cytosol	42.98	51.53
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	45.53	51.44
AT2G38640.1	Thale cress	cytosol	42.55	51.02
Bra000079.1-P	Field mustard	cytosol	42.55	51.02
CDY07715	Canola	cytosol	42.55	51.02
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	44.68	50.97
CDX91482	Canola	cytosol	42.13	50.77
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	43.83	50.74
Bra017111.1-P	Field mustard	cytosol	41.7	50.0
CDY18377	Canola	cytosol	41.7	50.0
TraesCS3B01G372400.1	Wheat	plastid	43.83	50.0
Os01t0817650-00	Rice	cytosol, extracellular, plastid	45.11	49.77
EES01655	Sorghum	cytosol	44.26	49.76
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	43.4	49.76
Bra005092.1-P	Field mustard	cytosol	41.28	49.74
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	42.98	49.51
CDX93313	Canola	cytosol	41.28	49.49
CDY60759	Canola	cytosol	40.85	49.23
TraesCS5D01G147200.1	Wheat	cytosol	47.23	48.68
KRH09578	Soybean	cytosol	42.55	48.08
TraesCS5B01G144000.1	Wheat	cytosol	46.38	47.81
Zm00001d038514_P001	Maize	plastid	45.96	47.79
EES19708	Sorghum	plastid	45.53	47.77
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	42.98	47.64
Os11t0120300-01	Rice	cytosol	44.26	47.06
Os05t0311500-01	Rice	cytosol	42.98	46.98
TraesCS5A01G145200.1	Wheat	cytosol	45.96	46.96
Zm00001d010627_P001	Maize	cytosol, plastid	45.11	46.9
Zm00001d012520_P001	Maize	cytosol	40.85	46.6
Os12t0120100-01	Rice	cytosol	43.83	46.4
HORVU5Hr1G046200.1	Barley	cytosol	45.96	46.35
TraesCS4B01G396800.1	Wheat	plastid	41.7	46.23
Os05t0484800-01	Rice	plastid	45.53	45.73
TraesCSU01G031000.1	Wheat	cytosol	40.85	45.71
TraesCS5A01G557700.1	Wheat	cytosol	40.0	45.63
Zm00001d052371_P001	Maize	cytosol	42.55	45.45
Zm00001d044671_P001	Maize	cytosol	42.13	45.41
EES16590	Sorghum	cytosol	42.13	44.0
GSMUA_Achr9P16860_001	Banana	cytosol	54.47	43.69
HORVU4Hr1G024080.1	Barley	cytosol	45.11	43.44
EES09153	Sorghum	cytosol	42.98	43.35
HORVU3Hr1G080430.1	Barley	plastid	42.98	43.16
EES15617	Sorghum	cytosol	42.13	43.04
TraesCS4B01G123400.1	Wheat	cytosol	44.68	43.03
TraesCS4A01G192000.1	Wheat	cytosol	44.26	42.62
TraesCS4D01G121500.1	Wheat	cytosol	44.26	42.62
EES16588	Sorghum	cytosol, nucleus, plastid	42.55	41.67
Zm00001d044474_P001	Maize	cytosol	40.85	40.0
TraesCS3A01G340900.1	Wheat	mitochondrion	44.68	37.91
EES09152	Sorghum	plastid	40.0	37.6
HORVU3Hr1G080440.1	Barley	plastid	43.83	36.01
GSMUA_Achr3P13680_001	Banana	cytosol	18.72	33.59
GSMUA_Achr11P...	Banana	cytosol	27.66	31.71
GSMUA_Achr7P21840_001	Banana	cytosol	26.81	30.58
Zm00001d052372_P002	Maize	plastid	40.85	30.48
HORVU4Hr1G089220.1	Barley	plasma membrane	25.96	23.28
GSMUA_Achr4P02400_001	Banana	cytosol	22.55	22.08
GSMUA_Achr3P24000_001	Banana	nucleus	29.79	8.47

Protein Annotations

EnsemblPlants:GSMUA_Achr11P19920_001	EnsemblPlants:GSMUA_Achr11T19920_001	EnsemblPlantsGene:GSMUA_Achr11G19920_001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF22	PFAM:PF04525
SEG:seg	SUPFAM:SSF54518	UniParc:UPI000294CCD2	UniProt:M0RTS2	MapMan:35.1	:

Description

Protein LURP-one-related 8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G19920_001]

Coordinates

chr11:+:20954066..20954956

Molecular Weight (calculated)

26012.3 Da

IEP (calculated)

9.052

GRAVY (calculated)

-0.107

Length

235 amino acids

Sequence
(BLAST)

001: MTKVHPSNTI PDLEFPEPAG ARRKDSNTVV LTVWRKSLLF SCSGFTVFDA EGNLVFRVDN YGSGSTGEIV LMDAAGKPLL TIRRKKLSFG ATWVIYDGED
101: VVDPLFSVKK HSNLLHSKVL AHVTSPCRRR RHRGGCGAGY EVEGSYSRRS CTVYDEMRRS VAEIRRKEAV GGVAFGGDVF RLVVHADVDT CLAMAILIVL
201: DQMFGSRVSF SCSFPPFLGP FLRSQTNTRQ EELSV

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.