Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G031000.1 | Wheat | cytosol | 95.15 | 93.33 |
| TraesCS4B01G396800.1 | Wheat | plastid | 93.2 | 90.57 |
| Os05t0311500-01 | Rice | cytosol | 71.84 | 68.84 |
| GSMUA_Achr11P... | Banana | cytosol | 47.57 | 49.49 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 48.06 | 49.01 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 47.57 | 47.12 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 45.15 | 46.5 |
| TraesCS1A01G303600.1 | Wheat | extracellular, plasma membrane | 46.12 | 46.12 |
| CDY07714 | Canola | cytosol | 42.72 | 45.13 |
| CDY62435 | Canola | cytosol | 42.72 | 45.13 |
| GSMUA_Achr10P... | Banana | plastid | 45.63 | 44.98 |
| AT2G38640.1 | Thale cress | cytosol | 42.72 | 44.9 |
| CDX91482 | Canola | cytosol | 42.23 | 44.62 |
| Bra000080.1-P | Field mustard | cytosol | 42.23 | 44.62 |
| CDY62436 | Canola | cytosol | 42.23 | 44.39 |
| Bra000079.1-P | Field mustard | cytosol | 42.23 | 44.39 |
| CDY07715 | Canola | cytosol | 42.23 | 44.39 |
| TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 44.17 | 44.17 |
| Bra005092.1-P | Field mustard | cytosol | 41.75 | 44.1 |
| TraesCS3A01G340700.1 | Wheat | cytosol, extracellular, peroxisome | 43.2 | 44.06 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 46.12 | 43.98 |
| Bra017111.1-P | Field mustard | cytosol | 41.75 | 43.88 |
| CDY18377 | Canola | cytosol | 41.26 | 43.37 |
| CDY60759 | Canola | cytosol | 40.78 | 43.08 |
| CDX93313 | Canola | cytosol | 40.78 | 42.86 |
| KRH09578 | Soybean | cytosol | 41.75 | 41.35 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 45.15 | 40.43 |
| GSMUA_Achr11P... | Banana | cytosol | 45.63 | 40.0 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 44.17 | 37.3 |
| HORVU4Hr1G089220.1 | Barley | plasma membrane | 46.12 | 36.26 |
| TraesCS3A01G340900.1 | Wheat | mitochondrion | 43.69 | 32.49 |
| TraesCS3A01G296300.1 | Wheat | cytosol | 30.1 | 28.18 |
| TraesCS3A01G449500.1 | Wheat | cytosol | 21.84 | 26.63 |
| TraesCS3A01G450000.1 | Wheat | cytosol | 24.76 | 26.02 |
| TraesCS3A01G449900.1 | Wheat | plastid | 24.27 | 25.51 |
| TraesCS3A01G449700.1 | Wheat | plastid | 23.79 | 25.39 |
| TraesCS3A01G449800.1 | Wheat | cytosol | 24.27 | 25.38 |
| TraesCS3A01G450100.1 | Wheat | cytosol | 23.79 | 25.0 |
| TraesCS3A01G449600.1 | Wheat | mitochondrion | 15.05 | 24.41 |
| TraesCS1A01G328100.1 | Wheat | cytosol | 28.64 | 24.28 |
| TraesCS2A01G113800.1 | Wheat | plastid | 24.27 | 23.92 |
| TraesCS3A01G450200.1 | Wheat | plastid | 22.82 | 23.74 |
| TraesCS5A01G144800.1 | Wheat | nucleus | 27.18 | 23.43 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 27.18 | 23.05 |
| TraesCS5A01G145000.1 | Wheat | nucleus, plastid | 28.16 | 16.25 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G557700.1 | EnsemblPlantsGene:TraesCS5A01G557700 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF29 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:708494696..708495475
Molecular Weight (calculated)
22553.1 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.211
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKIKVHPNV AAASLALPAA EEKGEAVSLT VWRRSLLFNG KGFTVFDTNG NLVYRVETHS RGSPREVVLM DAHGVALLTV RRKKLSLAEE WLVYDGDGDE
101: PAPRRFTARR NRSLLRTKSL ARLSPPRSLD GTGDAPGCRY DVEGSYAGRS LDMLACTGGN QRQRVATVCR KEAAVGLDVF RLVVEPDFEP ALAMAVVILL
201: DQMNTS
101: PAPRRFTARR NRSLLRTKSL ARLSPPRSLD GTGDAPGCRY DVEGSYAGRS LDMLACTGGN QRQRVATVCR KEAAVGLDVF RLVVEPDFEP ALAMAVVILL
201: DQMNTS
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.