Factsheet for TraesCS3A01G449900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G450000.1	Wheat	cytosol	94.39	94.39
TraesCS3B01G486900.1	Wheat	cytosol, plastid	92.86	92.86
TraesCS3A01G449800.1	Wheat	cytosol	91.84	91.37
TraesCS3D01G442600.1	Wheat	cytosol	91.33	89.5
TraesCS3B01G486600.1	Wheat	cytosol	89.29	88.83
TraesCS3D01G442800.1	Wheat	cytosol, plastid	90.31	88.06
TraesCS3A01G449500.1	Wheat	cytosol	75.51	87.57
TraesCS3A01G450200.1	Wheat	plastid	83.16	82.32
TraesCS3A01G449600.1	Wheat	mitochondrion	53.06	81.89
TraesCS3A01G449700.1	Wheat	plastid	80.1	81.35
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	87.76	81.13
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	89.29	81.02
TraesCS3A01G450100.1	Wheat	cytosol	80.61	80.61
EES04157	Sorghum	plastid	68.88	67.16
Zm00001d011925_P001	Maize	cytosol	63.78	61.27
EES04156	Sorghum	plastid	66.84	60.93
Zm00001d011926_P001	Maize	cytosol	62.76	60.89
Zm00001d042239_P001	Maize	plastid	67.86	60.73
Os01t0931600-00	Rice	cytosol	63.78	57.87
EES04155	Sorghum	cytosol	63.78	57.34
TraesCS2A01G113800.1	Wheat	plastid	40.31	37.8
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	39.8	32.1
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	30.61	29.13
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	29.59	28.71
TraesCS5A01G145200.1	Wheat	cytosol	31.63	26.96
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	27.55	26.21
TraesCS5A01G144800.1	Wheat	nucleus	30.1	24.69
TraesCS5A01G557700.1	Wheat	cytosol	25.51	24.27
TraesCS4A01G192000.1	Wheat	cytosol	29.08	23.36
TraesCS3A01G296300.1	Wheat	cytosol	25.51	22.73
TraesCS3A01G340900.1	Wheat	mitochondrion	30.61	21.66
TraesCS1A01G328100.1	Wheat	cytosol	26.02	20.99
TraesCS5A01G145000.1	Wheat	nucleus, plastid	30.1	16.53

Protein Annotations

EnsemblPlants:TraesCS3A01G449900.1	EnsemblPlantsGene:TraesCS3A01G449900	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:688977436..688978026

Molecular Weight (calculated)

21131.4 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.099

Length

196 amino acids

Sequence
(BLAST)

001: MAKIQPLAAA ASPSSSGVQQ GRQAYTVWMK SLVFNGNGCT VYGPDGAVAF RVDNYGCRGG REVFFMDREG NSLIRIRRKG FGMFRRWEVC RCAHNGGQEE
101: EATPWFSVRR AEKGGAAVAM HGGTGTCYTI DGCSARKSEY RVRGVDGAVV AEVARKQTPA GVVLGDDVLT LTVAPEVDHL LFLGLVVVRG LINRSL

Best Arabidopsis Sequence Match ( AT1G63410.1 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.