Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- extracellular 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 93.07 | 91.26 |
| TraesCS3D01G334200.1 | Wheat | cytosol | 91.58 | 91.13 |
| TraesCS3B01G372300.1 | Wheat | cytosol, peroxisome, plastid | 91.09 | 90.64 |
| TraesCS3B01G372600.1 | Wheat | cytosol, extracellular, peroxisome | 90.1 | 88.78 |
| HORVU4Hr1G047270.1 | Barley | cytosol, extracellular, peroxisome | 88.61 | 87.75 |
| HORVU3Hr1G080430.1 | Barley | plastid | 88.61 | 76.5 |
| Os01t0817650-00 | Rice | cytosol, extracellular, plastid | 76.73 | 72.77 |
| EES01655 | Sorghum | cytosol | 70.3 | 67.94 |
| TraesCS3A01G340900.1 | Wheat | mitochondrion | 92.57 | 67.51 |
| Zm00001d043087_P001 | Maize | cytosol, extracellular, plastid | 67.33 | 64.15 |
| HORVU3Hr1G080440.1 | Barley | plastid | 90.1 | 63.64 |
| TraesCS1A01G303600.1 | Wheat | extracellular, plasma membrane | 64.85 | 63.59 |
| Zm00001d012520_P001 | Maize | cytosol | 62.87 | 61.65 |
| GSMUA_Achr11P... | Banana | cytosol | 52.48 | 53.54 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 52.97 | 52.97 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 52.48 | 50.96 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 56.93 | 50.0 |
| GSMUA_Achr10P... | Banana | plastid | 50.99 | 49.28 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 46.53 | 47.0 |
| GSMUA_Achr11P... | Banana | cytosol | 51.98 | 44.68 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 47.03 | 43.98 |
| KRH09578 | Soybean | cytosol | 44.55 | 43.27 |
| TraesCS5A01G557700.1 | Wheat | cytosol | 44.06 | 43.2 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 51.98 | 43.03 |
| AT2G38640.1 | Thale cress | cytosol | 40.1 | 41.33 |
| CDY62436 | Canola | cytosol | 39.6 | 40.82 |
| CDY62435 | Canola | cytosol | 39.11 | 40.51 |
| CDY07714 | Canola | cytosol | 39.11 | 40.51 |
| CDY07715 | Canola | cytosol | 39.11 | 40.31 |
| Bra000079.1-P | Field mustard | cytosol | 38.61 | 39.8 |
| Bra017111.1-P | Field mustard | cytosol | 38.61 | 39.8 |
| CDY18377 | Canola | cytosol | 38.61 | 39.8 |
| Bra000080.1-P | Field mustard | cytosol | 38.12 | 39.49 |
| CDX91482 | Canola | cytosol | 38.12 | 39.49 |
| CDX93313 | Canola | cytosol | 38.12 | 39.29 |
| Bra005092.1-P | Field mustard | cytosol | 37.62 | 38.97 |
| CDY60759 | Canola | cytosol | 37.13 | 38.46 |
| TraesCS3A01G449700.1 | Wheat | plastid | 30.2 | 31.61 |
| TraesCS3A01G449900.1 | Wheat | plastid | 28.71 | 29.59 |
| TraesCS3A01G450000.1 | Wheat | cytosol | 28.71 | 29.59 |
| TraesCS3A01G449500.1 | Wheat | cytosol | 24.75 | 29.59 |
| TraesCS3A01G449600.1 | Wheat | mitochondrion | 18.32 | 29.13 |
| TraesCS3A01G449800.1 | Wheat | cytosol | 27.72 | 28.43 |
| TraesCS3A01G450100.1 | Wheat | cytosol | 27.23 | 28.06 |
| TraesCS3A01G296300.1 | Wheat | cytosol | 30.2 | 27.73 |
| TraesCS2A01G113800.1 | Wheat | plastid | 28.22 | 27.27 |
| TraesCS3A01G450200.1 | Wheat | plastid | 26.24 | 26.77 |
| TraesCS5A01G144800.1 | Wheat | nucleus | 30.69 | 25.94 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 27.23 | 22.63 |
| TraesCS1A01G328100.1 | Wheat | cytosol | 26.73 | 22.22 |
| TraesCS5A01G145000.1 | Wheat | nucleus, plastid | 31.19 | 17.65 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G340700.1 | EnsemblPlantsGene:TraesCS3A01G340700 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF21 | PFAM:PF04525 | SUPFAM:SSF54518 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:587884090..587884830
Molecular Weight (calculated)
21840.1 Da
IEP (calculated)
8.821
GRAVY (calculated)
-0.082
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVHPNMVA APGAIDEAPA SSAVDGPTTL TVWRKSLLFD CKGFTVFDAE GNLAYRVDSY ASESGDEVVL MDAAGRPAFT VRRKRLTLQG EQWLVFSGEE
101: TRRPVYTVRR SGRGKTLAHV TACAGTGAGP SYEVEGSYAR RSCVVYDGER RAVAEIRPKE VVGTDVFRLA VQPGVGVPLA MAVVVALEQM FARPSLLRSW
201: ST
101: TRRPVYTVRR SGRGKTLAHV TACAGTGAGP SYEVEGSYAR RSCVVYDGER RAVAEIRPKE VVGTDVFRLA VQPGVGVPLA MAVVVALEQM FARPSLLRSW
201: ST
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.