Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3A01G449600.1 | Wheat | mitochondrion | 65.8 | 100.0 |
TraesCS3B01G486300.1 | Wheat | plastid | 90.67 | 89.29 |
TraesCS3D01G442200.1 | Wheat | cytosol, plastid | 86.53 | 85.2 |
HORVU3Hr1G097260.1 | Barley | cytosol | 82.9 | 82.9 |
HORVU3Hr1G097270.1 | Barley | plastid | 82.9 | 82.9 |
TraesCS3A01G449500.1 | Wheat | cytosol | 71.5 | 81.66 |
TraesCS3A01G450000.1 | Wheat | cytosol | 81.35 | 80.1 |
TraesCS3A01G449900.1 | Wheat | plastid | 81.35 | 80.1 |
TraesCS3A01G450200.1 | Wheat | plastid | 81.35 | 79.29 |
TraesCS3A01G449800.1 | Wheat | cytosol | 79.27 | 77.67 |
TraesCS3A01G450100.1 | Wheat | cytosol | 75.13 | 73.98 |
EES04157 | Sorghum | plastid | 64.25 | 61.69 |
Zm00001d011926_P001 | Maize | cytosol | 62.69 | 59.9 |
Zm00001d011925_P001 | Maize | cytosol | 60.1 | 56.86 |
EES04156 | Sorghum | plastid | 63.21 | 56.74 |
EES04155 | Sorghum | cytosol | 63.73 | 56.42 |
Zm00001d042239_P001 | Maize | plastid | 63.73 | 56.16 |
Os01t0931600-00 | Rice | cytosol | 60.62 | 54.17 |
TraesCS2A01G113800.1 | Wheat | plastid | 37.82 | 34.93 |
TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 34.2 | 32.04 |
TraesCS3A01G340700.1 | Wheat | cytosol, extracellular, peroxisome | 31.61 | 30.2 |
TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 37.82 | 30.04 |
TraesCS1A01G303600.1 | Wheat | extracellular, plasma membrane | 31.09 | 29.13 |
TraesCS5A01G145200.1 | Wheat | cytosol | 30.57 | 25.65 |
TraesCS3A01G340900.1 | Wheat | mitochondrion | 34.2 | 23.83 |
TraesCS5A01G557700.1 | Wheat | cytosol | 25.39 | 23.79 |
TraesCS5A01G144800.1 | Wheat | nucleus | 29.02 | 23.43 |
TraesCS3A01G296300.1 | Wheat | cytosol | 26.42 | 23.18 |
TraesCS4A01G192000.1 | Wheat | cytosol | 29.02 | 22.95 |
TraesCS1A01G328100.1 | Wheat | cytosol | 25.39 | 20.16 |
TraesCS5A01G145000.1 | Wheat | nucleus, plastid | 29.53 | 15.97 |
Protein Annotations
EnsemblPlants:TraesCS3A01G449700.1 | EnsemblPlantsGene:TraesCS3A01G449700 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF12 | PFAM:PF04525 | SEG:seg |
SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:688915268..688915849
Molecular Weight (calculated)
21051.5 Da
IEP (calculated)
10.060
GRAVY (calculated)
-0.231
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIQPLPAA PSPPSSGDHR RGQQAYTVWM KSLVFNGNGC AVYGPDGSVA FRVDNYGCRG GREVFFMDRG GNALIRIRRK GFGMFRRWEV CRYEQGEEAT
101: PWFTVRRAKK GEAAVAMHGG ARTCYRMDGC PARKTEYKVR GVDGAAVAEV APKQTAAGVV LGEDVLTLTV APEMDHLLAL GMVVVRGLIN RSL
101: PWFTVRRAKK GEAAVAMHGG ARTCYRMDGC PARKTEYKVR GVDGAAVAEV APKQTAAGVV LGEDVLTLTV APEMDHLLAL GMVVVRGLIN RSL
001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
Arabidopsis Description
Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.