Factsheet for TraesCS2A01G113800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G019720.1	Barley	plastid	98.09	98.09
TraesCS2D01G114400.1	Wheat	plastid	98.09	94.91
TraesCS2B01G132800.1	Wheat	plastid	96.65	94.39
Os07t0672600-00	Rice	plastid	69.86	63.76
EER99890	Sorghum	plastid	57.89	59.61
VIT_02s0025g03730.t01	Wine grape	cytosol	44.02	45.54
VIT_02s0025g03740.t01	Wine grape	plastid	44.02	44.66
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	51.67	44.44
VIT_02s0025g03750.t01	Wine grape	cytosol	44.02	43.81
TraesCS3A01G450100.1	Wheat	cytosol	40.19	42.86
TraesCS3A01G449500.1	Wheat	cytosol	34.45	42.6
TraesCS3A01G449800.1	Wheat	cytosol	39.23	41.62
PGSC0003DMT400032165	Potato	cytosol	34.45	41.62
KRH27952	Soybean	cytosol	38.28	41.45
KRH77515	Soybean	cytosol	38.28	41.24
KRH47711	Soybean	peroxisome	38.76	41.12
PGSC0003DMT400007876	Potato	plastid	39.23	40.8
Solyc08g080770.2.1	Tomato	plastid	41.15	40.57
Bra027804.1-P	Field mustard	cytosol	36.84	40.31
CDY49893	Canola	cytosol	36.84	40.31
TraesCS3A01G449900.1	Wheat	plastid	37.8	40.31
KRH59852	Soybean	cytosol	37.8	40.31
KRH06275	Soybean	peroxisome	38.76	40.3
Solyc08g080760.1.1	Tomato	mitochondrion	38.28	40.2
PGSC0003DMT400032166	Potato	plastid	40.67	40.09
Solyc12g056310.1.1	Tomato	plastid	37.32	39.59
Solyc08g080750.2.1	Tomato	plastid	37.8	39.11
TraesCS3A01G450200.1	Wheat	plastid	36.84	38.89
Bra039698.1-P	Field mustard	cytosol	37.32	38.81
CDY24067	Canola	cytosol	37.32	38.81
TraesCS3A01G450000.1	Wheat	cytosol	36.36	38.78
Bra001544.1-P	Field mustard	cytosol	38.28	38.46
PGSC0003DMT400014913	Potato	plastid	38.28	38.46
CDY24068	Canola	peroxisome	36.84	38.31
TraesCS3A01G449700.1	Wheat	plastid	34.93	37.82
PGSC0003DMT400010898	Potato	cytosol	22.97	37.8
CDY45367	Canola	cytosol	27.75	37.66
Bra039696.1-P	Field mustard	cytosol	35.89	37.31
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	35.89	37.31
Solyc08g007980.2.1	Tomato	plastid	36.84	37.02
TraesCS3A01G449600.1	Wheat	mitochondrion	22.49	37.01
CDY71164	Canola	cytosol, extracellular, peroxisome	33.97	36.98
AT1G63410.2	Thale cress	cytosol	36.84	35.81
Bra021544.1-P	Field mustard	cytosol	35.41	35.58
KRH41152	Soybean	cytosol	25.36	35.57
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	36.36	35.02
CDX82489	Canola	cytosol	38.28	34.78
CDX75761	Canola	cytosol	37.8	34.35
CDY24069	Canola	cytosol	28.71	34.29
CDY33238	Canola	cytosol, peroxisome, plastid	36.84	33.48
AT3G14260.1	Thale cress	cytosol	36.36	33.04
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	35.89	32.89
PGSC0003DMT400012847	Potato	cytosol	20.57	32.58
CDY36610	Canola	cytosol	22.97	32.43
CDY67855	Canola	peroxisome	35.41	32.17
CDY36612	Canola	cytosol	20.1	30.88
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	29.67	30.1
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	27.27	28.22
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	27.27	27.67
TraesCS5A01G145200.1	Wheat	cytosol	28.23	25.65
AT1G53890.3	Thale cress	cytosol	28.71	24.69
TraesCS5A01G557700.1	Wheat	cytosol	23.92	24.27
TraesCS3A01G296300.1	Wheat	cytosol	24.4	23.18
TraesCS5A01G144800.1	Wheat	nucleus	26.32	23.01
TraesCS4A01G192000.1	Wheat	cytosol	25.36	21.72
TraesCS1A01G328100.1	Wheat	cytosol	24.4	20.99
TraesCS3A01G340900.1	Wheat	mitochondrion	27.75	20.94
TraesCS5A01G145000.1	Wheat	nucleus, plastid	29.19	17.09
GSMUA_Achr3P24000_001	Banana	nucleus	47.37	11.99

Protein Annotations

EnsemblPlants:TraesCS2A01G113800.1	EnsemblPlantsGene:TraesCS2A01G113800	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF51	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:65182666..65183411

Molecular Weight (calculated)

22696.4 Da

IEP (calculated)

9.820

GRAVY (calculated)

-0.186

Length

209 amino acids

Sequence
(BLAST)

001: MARVHSSPSF SSSSSPAGEG RGKVFTLWLK SLVLNGRGCT VYDSDGHIVY RVDNYGSKCS DNVCLMDLRG NIVVNIHKKK LAFGKWEGYK WTGRKQEASA
101: WFKVARPRSG IFHRSGRRPS SSPCEFESDA GRAMRYMIDD DGGARAGKRA CCRIVDAGTG LVVAEVKRKV TAGGVALGED VLALVVEPGV DDSLIMGLVL
201: VYGLMNRTM

Best Arabidopsis Sequence Match ( AT1G53875.1 )
(BLAST)

001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL

Arabidopsis Description

LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.