CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41152	Soybean	cytosol	70.41	92.62
KRH27952	Soybean	cytosol	65.82	66.84
KRH77515	Soybean	cytosol	64.29	64.95
VIT_02s0025g03730.t01	Wine grape	cytosol	47.96	46.53
VIT_02s0025g03740.t01	Wine grape	plastid	48.47	46.12
VIT_02s0025g03750.t01	Wine grape	cytosol	48.47	45.24
PGSC0003DMT400032165	Potato	cytosol	39.8	45.09
Solyc12g056310.1.1	Tomato	plastid	44.9	44.67
Solyc08g080770.2.1	Tomato	plastid	46.94	43.4
PGSC0003DMT400007876	Potato	plastid	44.39	43.28
Solyc08g080760.1.1	Tomato	mitochondrion	42.86	42.21
Solyc08g080750.2.1	Tomato	plastid	43.37	42.08
PGSC0003DMT400032166	Potato	plastid	44.9	41.51
Bra027804.1-P	Field mustard	cytosol	40.31	41.36
CDY49893	Canola	cytosol	40.31	41.36
PGSC0003DMT400012847	Potato	cytosol	27.55	40.91
KRH06275	Soybean	peroxisome	41.33	40.3
PGSC0003DMT400010898	Potato	cytosol	26.02	40.16
KRH47711	Soybean	peroxisome	40.31	40.1
Solyc08g007980.2.1	Tomato	plastid	41.84	39.42
PGSC0003DMT400014913	Potato	plastid	41.84	39.42
CDY45367	Canola	cytosol	30.1	38.31
HORVU2Hr1G019720.1	Barley	plastid	40.82	38.28
TraesCS2A01G113800.1	Wheat	plastid	40.31	37.8
AT1G63410.2	Thale cress	cytosol	41.33	37.67
EER99890	Sorghum	plastid	38.78	37.44
TraesCS2B01G132800.1	Wheat	plastid	40.31	36.92
TraesCS2D01G114400.1	Wheat	plastid	40.31	36.57
Os07t0672600-00	Rice	plastid	41.33	35.37
Zm00001d029119_P001	Maize	mitochondrion	39.29	31.17
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	38.27	30.86
KXG39402	Sorghum	mitochondrion	39.8	30.23
HORVU6Hr1G081400.1	Barley	mitochondrion	38.78	30.04
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	37.76	29.6
TraesCS4D01G168500.1	Wheat	mitochondrion	38.78	29.46
KRH47444	Soybean	cytosol	27.55	24.66
KRH09578	Soybean	cytosol	26.02	24.52
KRH09722	Soybean	cytosol	27.04	24.2
KRH23583	Soybean	cytosol	27.04	24.09
KRH77592	Soybean	cytosol	27.55	23.79
KRH44464	Soybean	cytosol	26.53	23.74
KRH41249	Soybean	cytosol	26.02	22.77
KRH27882	Soybean	cytosol	27.04	22.65
KRH59981	Soybean	cytosol, mitochondrion	25.0	21.4
GSMUA_Achr3P24000_001	Banana	nucleus	42.86	10.17

Protein Annotations

EMBL:ACUP02003342	EMBL:BT092529	EnsemblPlants:KRH59852	EnsemblPlantsGene:GLYMA_05G206200	EntrezGene:100527667	Gene3D:3.20.90.20
InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087
PANTHER:PTHR31087:SF25	PFAM:PF04525	ProteinID:KRH59852	ProteinID:KRH59852.1	SUPFAM:SSF54518	UniParc:UPI0001B14FB0
UniProt:C6T517	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:38904753..38908922

Molecular Weight (calculated)

21910.7 Da

IEP (calculated)

9.086

GRAVY (calculated)

-0.139

Length

196 amino acids

Sequence
(BLAST)

001: MAKVYPQIPT SPDQTQCLTT KRETYTLWLK SLVFHSNGCT VYDSNGDIVY RVDNYDRKGR REVNLMDLRG KVLCTIKKRL LALGCWEGHR CISSDFGTQE
101: QPWFQVKRCN QMIKGKVTCQ ISVGSQKYSI VRISGKAEAF KIVNIDGQIV AEAKQKHSPT GVVLSNDVLT LDLAAGTDHS LMMALVTVYG LICGIM

Best Arabidopsis Sequence Match ( AT1G63410.2 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGI DGEVKQLRDF
201: EEEEVAVGDE IAIEI

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.