CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
plastid 2
peroxisome 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27952	Soybean	cytosol	89.18	89.64
KRH59852	Soybean	cytosol	64.95	64.29
KRH41152	Soybean	cytosol	45.88	59.73
VIT_02s0025g03740.t01	Wine grape	plastid	48.45	45.63
VIT_02s0025g03730.t01	Wine grape	cytosol	47.42	45.54
PGSC0003DMT400032165	Potato	cytosol	39.69	44.51
VIT_02s0025g03750.t01	Wine grape	cytosol	46.91	43.33
PGSC0003DMT400010898	Potato	cytosol	28.35	43.31
PGSC0003DMT400012847	Potato	cytosol	29.38	43.18
Bra027804.1-P	Field mustard	cytosol	41.75	42.41
Solyc08g080760.1.1	Tomato	mitochondrion	43.3	42.21
CDY49893	Canola	cytosol	41.24	41.88
PGSC0003DMT400007876	Potato	plastid	43.3	41.79
Solyc08g080750.2.1	Tomato	plastid	43.3	41.58
PGSC0003DMT400032166	Potato	plastid	45.36	41.51
Solyc08g080770.2.1	Tomato	plastid	45.36	41.51
Solyc08g007980.2.1	Tomato	plastid	44.33	41.35
PGSC0003DMT400014913	Potato	plastid	44.33	41.35
Solyc12g056310.1.1	Tomato	plastid	41.75	41.12
HORVU2Hr1G019720.1	Barley	plastid	41.75	38.76
EER99890	Sorghum	plastid	40.21	38.42
CDY45367	Canola	cytosol	30.41	38.31
TraesCS2A01G113800.1	Wheat	plastid	41.24	38.28
AT1G63410.2	Thale cress	cytosol	42.27	38.14
TraesCS2B01G132800.1	Wheat	plastid	41.75	37.85
KRH06275	Soybean	peroxisome	39.18	37.81
KRH47711	Soybean	peroxisome	38.14	37.56
TraesCS2D01G114400.1	Wheat	plastid	41.24	37.04
Os07t0672600-00	Rice	plastid	42.27	35.81
KXG39402	Sorghum	mitochondrion	42.78	32.17
Zm00001d029119_P001	Maize	mitochondrion	40.72	31.98
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	38.66	30.86
HORVU6Hr1G081400.1	Barley	mitochondrion	39.18	30.04
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	38.66	30.0
TraesCS4D01G168500.1	Wheat	mitochondrion	39.18	29.46
KRH09578	Soybean	cytosol	27.32	25.48
KRH47444	Soybean	cytosol	25.77	22.83
KRH23583	Soybean	cytosol	25.77	22.73
KRH09722	Soybean	cytosol	25.26	22.37
KRH44464	Soybean	cytosol	24.74	21.92
KRH41249	Soybean	cytosol	25.26	21.88
KRH77592	Soybean	cytosol	24.74	21.15
KRH27882	Soybean	cytosol	25.26	20.94
KRH59981	Soybean	cytosol, mitochondrion	24.23	20.52
GSMUA_Achr3P24000_001	Banana	nucleus	41.75	9.81

Protein Annotations

EMBL:ACUP02000676	EnsemblPlants:KRH77515	EnsemblPlantsGene:GLYMA_01G218200	EntrezGene:100815833	Gene3D:3.20.90.20	InterPro:IPR025659
InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25
PFAM:PF04525	ProteinID:KRH77515	ProteinID:KRH77515.1	SUPFAM:SSF54518	UniParc:UPI0002336B74	UniProt:I1JA56
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:54828731..54829941

Molecular Weight (calculated)

21883.7 Da

IEP (calculated)

9.408

GRAVY (calculated)

-0.205

Length

194 amino acids

Sequence
(BLAST)

001: MAKKVYPQDP TSSPCMSHGP ETYTLWMKSL ILHSNGCTVY DSNGVIVYRV DNYDTKGRRH VNLLDLRGRV LCTIHKKLLA FGRWDVYRGS DNSNFKTQEK
101: PWFQVKRCYK MVTRKITCQI TVECQKYCIK KIGGKTTFQI VNIDGDTVAD AKQKHSSSGV VLGNDVLTLD VEGGIDHSLI MALVIVFGLI CGRM

Best Arabidopsis Sequence Match ( AT1G63410.1 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.